| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | lpl1985 |
|---|
| Symbol | spoT |
|---|
| ID | 3114620 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Legionella pneumophila str. Lens |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_006369 |
|---|
| Strand | - |
|---|
| Start bp | 2225296 |
|---|
| End bp | 2227419 |
|---|
| Gene Length | 2124 bp |
|---|
| Protein Length | 707 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637583756 |
|---|
| Product | guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase |
|---|
| Protein accession | YP_127321 |
|---|
| Protein GI | 54294906 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
|---|
| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCTACT TTAAAGAGCT CGATGAAGAG CTTAAATGCT ACCTTGAGCA GGCACAAATA
GAGAAATGTT ATCAAGCTTA TTTGGTGGCT GAAAAAGCAC ACCATGGCCA AATGCGTCGT
TCAGGTGAGC CTTATATTAC ACACCCTGTA GCAGCAGCCC TCATTCTGGC AAGAATGAGG
CTGGACTATC AAACTATCAT GGCCACTCTG CTTCATGACG TCGTTGAAGA TACCTCCATA
AGTAAAGAAG AACTGGTTAA TCAATTTGGT GAAGAAGTCA CTGCCCTTGT TGATGGTGTC
ACCAAGCTCA CCAAAATTAA ATTTGAATCA AAGGCCGAAG CTCAAGCGGA AAATTTTCGC
AAGATGGTTT TGGCTATGGT TAAGGACATT CGCGTTATTA TCGTTAAATT GGCTGATCGC
TTACATAATA TGCGCACTTT AGGATCAATG CCCGCAGCCA AGCGCAGACG AATTGCAATT
GAAACGCTCG AGATTTATGC CCCTATTGCT AATCGTTTGG GTATGCATTC TATTTATATC
GGCCTTGAGG ATTTGGGTTT TCAAGCTTTA TATCCTATGC GTTACAGGGC AATTAAGTCT
GCTGTTGAAA AATCTCGGGG AAATCGAAGA GAGTTGACAC AGACTATAGA GAAAGATTTG
CAACACGCCT TATCGCAATT GAACATTCCT TATGAACAAG TATTTGGCAG GCAAAAGCAT
TTATATAGTA TTTATAGAAA AATGAAACAG AAAAAAGCAT CCTTTACAGA AATTACGGAT
GTGTTCGCAT TTCGCATCAT TACAGAAGAC ATTGACTCCT GTTATAGAAT TTTGGGAGCT
TTACACTGTA CTTATAAACC TGTCCCACAA CGATTTAAAG ATTATATCGG AATTCCCAAA
GCCAATGGCT ATCAGTCATT GCATACCACT TTGTTTGGGC CTTTTGGTGT TCCTCTTGAG
GTTCAAATAC GCACAAGAGA GATGGATAAA GTAGCTGATA ATGGTGTAGC AGCGCACTGG
ATCTATAAAT CTTCCGGATT GGAAGTCAAT GAAGCTCAAC TTCGTGCCAG AGAGTGGGTT
CAAAGTTTGC TAGAAATGCA AAGGAGCACG GGCAGTTCTC TTGAATTTAT CGAAAACGTT
AAAATAGATT TATTTCCTGA TGAAGTATAT GTTTTTACTC CCAAAGGGCA CATTATGGAG
TTGCCGAAAG GAGCCACTCC TGTAGATTTT GCATACACGG TACACTCTGG AGTGGGAAAT
AGTTGTGTTG CAGCGAAAGT GAACAGGCGT TTGGTTCCTT TAAGCATTCC TTTATCCAAT
GGTCAAACCG TAGAGATTAT TACAGCCCCG GGAGCACACC CCAACCCGGC TTGGCTGAAT
TTTGTTGTGA CTGGAAAAGC AAGATCAAAT ATTCGTCATT TTCTGAAAAG CCAACAACAC
GCTGAGTCTA TTGTTTTAGG CAAACGATTA TTGGAGCAAT CATTGGCTGA ATTATCCAGT
GATTACGCCA AAGTGCCTCC GGAAACATTA CAGGCATTGC TCAGCGATTT ACACTATAAA
ACGGTTGATG ACTTATTGTA TGCCATAGGA ATAGGTAATC AGATGGCAAT GGTTATTGCC
AAGCGGTTGG TAGTTTCGCA AGACGCCAAT GAATCGGATA AGGGCAATAA AAAACCTTTG
GCTATTAAAG GCACTGAAGG GATGGTTGTG CATTTTGGTG AATGCTGCCA ACCAATACCT
GGAGATAATA TAGTTGGTAA ATTTCAACAA GGCAGAGGCA TTATTGTTCA TGCCAGTGAC
TGCACTACAC TAAAAACAAC TCGTAGTAAT CCGGAACAGT TTATTGCTTT GCGTTGGGAT
GAGCAGGTTC AGGGTGAATA TTGGGTAGAC ATTACTGTAG ATGTAGCCAA CGAAAGAGGT
GTATTGGCTG CTTTAGCAAC TGCTATTTCA GAGGCAGACT CTAATATAGG GAATATTAAT
GTGGATCCTA GGGATGGTCG TCATAATGCG GTCACTTTTT CCATCAGTGT TCGTGACAGA
ACCCATTTGG CTCGAGTCAT GCGTCGATTA AGAGCAAATA AAGTAGTTAT GCGGTTATAT
CGAAAAAAAC AAGGGGAGAT TTAA
|
|---|
| Protein sequence | MSYFKELDEE LKCYLEQAQI EKCYQAYLVA EKAHHGQMRR SGEPYITHPV AAALILARMR
LDYQTIMATL LHDVVEDTSI SKEELVNQFG EEVTALVDGV TKLTKIKFES KAEAQAENFR
KMVLAMVKDI RVIIVKLADR LHNMRTLGSM PAAKRRRIAI ETLEIYAPIA NRLGMHSIYI
GLEDLGFQAL YPMRYRAIKS AVEKSRGNRR ELTQTIEKDL QHALSQLNIP YEQVFGRQKH
LYSIYRKMKQ KKASFTEITD VFAFRIITED IDSCYRILGA LHCTYKPVPQ RFKDYIGIPK
ANGYQSLHTT LFGPFGVPLE VQIRTREMDK VADNGVAAHW IYKSSGLEVN EAQLRAREWV
QSLLEMQRST GSSLEFIENV KIDLFPDEVY VFTPKGHIME LPKGATPVDF AYTVHSGVGN
SCVAAKVNRR LVPLSIPLSN GQTVEIITAP GAHPNPAWLN FVVTGKARSN IRHFLKSQQH
AESIVLGKRL LEQSLAELSS DYAKVPPETL QALLSDLHYK TVDDLLYAIG IGNQMAMVIA
KRLVVSQDAN ESDKGNKKPL AIKGTEGMVV HFGECCQPIP GDNIVGKFQQ GRGIIVHASD
CTTLKTTRSN PEQFIALRWD EQVQGEYWVD ITVDVANERG VLAALATAIS EADSNIGNIN
VDPRDGRHNA VTFSISVRDR THLARVMRRL RANKVVMRLY RKKQGEI
|
|---|
| |