Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | lpl1977 |
Symbol | secD |
ID | 3114212 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Legionella pneumophila str. Lens |
Kingdom | Bacteria |
Replicon accession | NC_006369 |
Strand | - |
Start bp | 2217639 |
End bp | 2219495 |
Gene Length | 1857 bp |
Protein Length | 618 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637583748 |
Product | preprotein translocase subunit SecD |
Protein accession | YP_127313 |
Protein GI | 54294898 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0342] Preprotein translocase subunit SecD |
TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family [TIGR01129] protein-export membrane protein SecD |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAATA AATATCCTCT ATGGAAAAAT CTAATGCTGA TAGTGATTGC AGTCATTGGA TTTGTTTACG CTATACCGAA TTTGTATACG GAAAATCCCG TTGTTCAAAT TTCTGCGGGT ACAGATGAAG ACACAGAGAC AATAAAAAAT CAGGTAGAGT CCATATTAAA AAATGCCAAT ATGGATTATA AATCTCTGGT TGTGGAGAGG GATGGGGTAG AGGTAGTATT TTCTTCTACT GATTCTCAAT TATTAGCTCG TGATGTTATC AAGAATAGCC TGGGATCTGA TTACACAGTG GCTTTGAATT TAGCGCCTTC CACACCAGCT TGGCTTGAAG CAATTCATGC TGACCCCATG AAGCAAGGGT TGGACTTAAG AGGCGGTGTT CATTTTCTTC TTGAAGTGGA TGTCGAGAGT GTTATAAGTC GGCGTTATGA AGGAATAATG AAAAATATTG GCCAAGAATT ACGTGAAGCA GGTATTCGTT ATTCAGGCAT ACGTTATTTA TCAGATAAAG GGATTGAATT GCGTTTCAGA GATTCTGACT CAATGGAAAA TGCTTTAGTT GAGTTAAGAC AAAAAATATC TGATGTGGTT TTTGTTAAAA CTAAAACACA AAATTCAATT TTAGGCGCCA TTTCTCCAGC AGAATTAAAT TCCATAAGAC AAAATACTAT TGAGCAGACA ATGAGTATCT TGAGAAATCG TGTCAACGAG CTCGGAGTTG GTGAAGCTGT CGTACAACAA CAAGGGGCGA CTCGAGTCGC CGTTGATTTG CCAGGCATTC AAGACGCAGC CAGAGCAAAA CAAATACTTG GTGGTACTGC TACTTTGGAA TTTCATTTGG TTGATCAGGA AAATGACCCT TTCATTGCAA AGCAAACCGG CGTAGTTCCT GTCAATGATA AGCTGTATAT GATGGATGGT CATCCTATCT TATTAAAGAG ACAGGTTGTT TTAAGTGGTG ACTCTATTAC GTCAGCAGTA TCCAGTTTTG ATCAACAAAC GGCTTCTCCA TCTGTTCAAA TTCAATTGGG TGGTGGGGGC GAGAGCTTGT TTACTAAAGT TACGCGTGAA AATATCGGTA AGCGCATGGC GATCGTTTTT GTGGAAACCA AAACGACTAC ACAAACAATT AATGGCGAGG AAAAACGAGT AACAAAGAAA GAAGAGCGAG TTATTAGTGC GCCAGTGATT CAAAATGCTT TAGGCAGTAA TTTCCAGATT ACCGGACTGA CTGATAGTAA AGAAGCGAGT AATCTGGCTT TATTATTAAG AGCTGGTGCT TTACCCGCTG CAATTTATCC TGTTGAAGAG CGTACCGTTG GCCCAACTCT TGGAAAGGAA AATATTCGCC GAGGACTTAT TTCCCTGGAA GTTGGTATGG GTTTAATTTT GGCACTAATG CTCGTGTATT ATCATTTTTT TGGTTTAATT GCTGATATTG CATTGATGCT GAATTTAGTT TTTCTTTGCG CATTGTTATC CATAATTGAT GCGACTCTGA CTTTACCGGG AATTGCGGGG ATTGTTTTGA CCGTGGGCAT GGCTGTTGAT GCCAATGTCC TGATTTATGA GCGGATTAGA GAGGAGTTGC GCAATGGACT GTCTCCTCAA GCTGCTATTC ATGCAGGATA TGAGCGAGCA TTTTCAACTA TATTGGATGC CAACGTGACT ACTTTAATTG TAGCTATCAT TTTATTCGCG GTGGGCACAG GACCGGTGCG CGGGTTTGCG GTTGTCCTTT CTCTAGGTTT GTTAACTTCT ATGTTAACTG GTATTACTTA CACCAGGGCT ATTGTGAATT GGTATTATGG TGGACGTAAT GTCAAAAAAT TATCTATAGG CATATAA
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Protein sequence | MQNKYPLWKN LMLIVIAVIG FVYAIPNLYT ENPVVQISAG TDEDTETIKN QVESILKNAN MDYKSLVVER DGVEVVFSST DSQLLARDVI KNSLGSDYTV ALNLAPSTPA WLEAIHADPM KQGLDLRGGV HFLLEVDVES VISRRYEGIM KNIGQELREA GIRYSGIRYL SDKGIELRFR DSDSMENALV ELRQKISDVV FVKTKTQNSI LGAISPAELN SIRQNTIEQT MSILRNRVNE LGVGEAVVQQ QGATRVAVDL PGIQDAARAK QILGGTATLE FHLVDQENDP FIAKQTGVVP VNDKLYMMDG HPILLKRQVV LSGDSITSAV SSFDQQTASP SVQIQLGGGG ESLFTKVTRE NIGKRMAIVF VETKTTTQTI NGEEKRVTKK EERVISAPVI QNALGSNFQI TGLTDSKEAS NLALLLRAGA LPAAIYPVEE RTVGPTLGKE NIRRGLISLE VGMGLILALM LVYYHFFGLI ADIALMLNLV FLCALLSIID ATLTLPGIAG IVLTVGMAVD ANVLIYERIR EELRNGLSPQ AAIHAGYERA FSTILDANVT TLIVAIILFA VGTGPVRGFA VVLSLGLLTS MLTGITYTRA IVNWYYGGRN VKKLSIGI
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