Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | lpl1724 |
Symbol | fliF |
ID | 3114516 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Legionella pneumophila str. Lens |
Kingdom | Bacteria |
Replicon accession | NC_006369 |
Strand | - |
Start bp | 1925483 |
End bp | 1927117 |
Gene Length | 1635 bp |
Protein Length | 544 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637583487 |
Product | flagellar MS-ring protein |
Protein accession | YP_127062 |
Protein GI | 54294647 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCATTGG CTGATAATGC TTCAGTAGCA GCTACAAAAT TTGCAAGCTT ATCTATACCA CGCCAAATTG GAGTGTTGTT TGGATTGGCA GCCAGTATTG CAATAGGCGT GGCAGTGGTT CTATGGTCTC GTGATCCAAG CTATGTTCCT TTATATAGCC AGCTCAATGC GCAGGATTCA TCAGAGATTT TGACTGTTTT AGAGCGCAAT AGTATTGATT TCAAAATTGA CAAGAATAAT GGCTTGTTGA TGGTGCCTGC TGATGAGCTG CAAAGTGCGC GTTTGAAATT GGCCGCACAA GGATTGCCTC GCGATACTGC CATAGGTCAT GATCTTTTAG GTAGCAGTGG TGGTGTGTTT AATACCAGTC AATTTATGGA AAACGCCCGA TATAAGCAAG CTCTTGAGGC TGAATTAGCA CGTACGATCA GTAAATTTAA TAATATTAAA TCGGCCAGAG TGCACTTGGC AATTCCAAGA GAGTCAGCCT TTGTAAGAGA CTCACAAGAG CCTAGTGCTT CTGTATTTAT TGATGTGTAT TCAGGATTTG AAATAAAGAA ACATACCATT GCAGCAATTG TCAATTTAGT AGCATCAAGT ATTCCGAATT TAAGCACAGG AAGAGTAACA GTAGTTGATC AAGACGGACA ATTGCTAAAT GAGGGTAGCG GATATAACCT CTTTTCGGAG ACCGAGCGTT TTCTTGATTA CAGACAAAAC CTGGAGCATC AATACGCTCA AAAAATTCAG GATATCTTAA CCCCAATATT GGGATACGGC CGTGTCAGGG CCAAAGTATC TGCAGATATT GACTTTACCA GCTATGAACA AACTCAAGAA TTGTTCAATC CGGAGCTCTC TGCTTTACGC AGCGAACAAA CTATGCAAGA GAGTCGTAAT GCGTCAAATG AAGCAAGCGG GGTTCCTGGG ACATTATCCA ATACTCCTCA ACCAAATAGT TCTCTTGGGC AAAAAAATAA TCCTCAACAA AATGCAACGC CAAATAACTT ACCTCAACAA ACATCGTCAG ATCAAATGCA GGCAAAGGAT GTTCGCATGC AAACGACTAA AAATTTCGAA TTGGATAAAA CAATAAGTCA TACTAAAAAT CAGCCAGGAA CAATAAAACG CTTGTCGGTT GCGGTATTGG TAGATAATCG ACCTGTAATG AATGATAAAA CCAAGAAACT GGAGAAGAAA CCGCTAACTA AAGAAGAAAT CGAACAAATA AAGTTATTGG TTTCTGATGC CATAGGATTG AATGTTAAGA GGGGAGATAG TTTGAATGTG ATCAATAGTA GCTTTGTAAA GCCAGATCCT ATAGAAGCAA TTCCAGAAGA GCATTTTTGG CAAAAAGACA GTTTTTTGTC TGTGATTAAG CAGATTGGCG GGGCCCTTTT TATATTGGCA ATCCTATTTG GTGTATTAAG GCCTATGTTA AAAACATTGG CAAGCAATAA AGACATGGAT CAAGCCACTG ATAATCAGGA TACAGGAGAC TTCACATTAG ATGGAAAAAT ATCATTTAGA GATGTTCAGG ATTATGAAAC TCAGCTAAGT TTACTTCGTC AAGTGGTTGA TAAAGAGCCC AAACGCGTCG CACAAGTAGT GAAATCATGG GTTGATCGGG GGTAA
|
Protein sequence | MALADNASVA ATKFASLSIP RQIGVLFGLA ASIAIGVAVV LWSRDPSYVP LYSQLNAQDS SEILTVLERN SIDFKIDKNN GLLMVPADEL QSARLKLAAQ GLPRDTAIGH DLLGSSGGVF NTSQFMENAR YKQALEAELA RTISKFNNIK SARVHLAIPR ESAFVRDSQE PSASVFIDVY SGFEIKKHTI AAIVNLVASS IPNLSTGRVT VVDQDGQLLN EGSGYNLFSE TERFLDYRQN LEHQYAQKIQ DILTPILGYG RVRAKVSADI DFTSYEQTQE LFNPELSALR SEQTMQESRN ASNEASGVPG TLSNTPQPNS SLGQKNNPQQ NATPNNLPQQ TSSDQMQAKD VRMQTTKNFE LDKTISHTKN QPGTIKRLSV AVLVDNRPVM NDKTKKLEKK PLTKEEIEQI KLLVSDAIGL NVKRGDSLNV INSSFVKPDP IEAIPEEHFW QKDSFLSVIK QIGGALFILA ILFGVLRPML KTLASNKDMD QATDNQDTGD FTLDGKISFR DVQDYETQLS LLRQVVDKEP KRVAQVVKSW VDRG
|
| |