| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | lpl1497 |
|---|
| Symbol | prpD |
|---|
| ID | 3114213 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Legionella pneumophila str. Lens |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_006369 |
|---|
| Strand | + |
|---|
| Start bp | 1666654 |
|---|
| End bp | 1668102 |
|---|
| Gene Length | 1449 bp |
|---|
| Protein Length | 482 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637583268 |
|---|
| Product | 2-methylcitrate dehydratase |
|---|
| Protein accession | YP_126843 |
|---|
| Protein GI | 54294428 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2079] Uncharacterized protein involved in propionate catabolism |
|---|
| TIGRFAM ID | [TIGR02330] 2-methylcitrate dehydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACAATT ATGTAGAGGA TAATGTTAAG CCACACTATG ATCAGGTTAT AGCAGATATA
GCTGATTTTG TATTAAATAA AGAAATTGAT AGTGTGCAGG CCTATGAGAC TGCACGGTTA
TGCTTAATGG ATACACTCGG TTGTGGCATA TTGGCCCTTA ATTTTCAGGA ATGTACCAAA
TTAATGGGTC CTATAGTACC GGGAGCAACT CTTCCTGGAG GCGCGAGAGT ACCAGGTACT
AATTATGAAC TGGATCCGGT TCAAGCTGCC TTTAACATCG GTACGATGAT ACGCTGGCTA
GACTTTAATG ATACTTGGCT CGCTGCAGAA TGGGGGCACC CCTCTGATAA TTTGGGTGCT
ATTTTGGCTG TTGCCGATTA TTTGTGCCGT GAAAATTGTA ATCATGGACG TCCTCCCATT
TTGATGCATG ATGTACTTAC AGCAATGATT AAAGCACATG AAATTCAAGG TTGTTTGGCA
CTGGAAAATA GCTTCAATCG CGTCGGCCTT GATCATGTCA TATTAGTTAA AGTAGCAAGT
GCCGCTGTTG CTGCTCACTT GTTTGGAGCA GATCGTGATA TGATGCTAAG AACTCTCTCG
CAGGTTTTTG TGGATGGACA AAGTTTGAGA ACATATAGAC ATGCTCCCAA TGCAGGTTCA
AGGAAATCAT GGGCAGCAGG AGATGCTACC TCGCGTGCGG TTCGTTTGGC TTTAATTGCC
AAGGCAGGGG AAATGGGATA TCCAAGCGCC TTGACCGCAC AAACATGGGG ATTTTATGAC
GTGCTATTTG GTAATAAACA ATTCAATTTT CAACGCCCTT ACGGCAGCTA TGTGATGGAA
AATGTGTTAT TCAAGTTATC TTATCCTGCT GAATTTCATG CACAAACCGC TGTCGAATGT
GCTGTAAAAT TACATCCTAT AGTAAAAAAT AGATTAGAGG ACATTGCTAG AATTGAATTA
ATCACACATG AGTCAGCAAT AAGAATAATA AGTAAGCAAG GTGCTTTATA TAATCCTGCC
GACCGAGATC ACTGCTTGCA ATATATGGTT GCAGTAGGAC TTCTCTTTGG TGATTTAAAG
GCAGAGCATT ATGAAGACGA CGTTGCCGCA GATCCCAGAA TAGATGCTTT ACGAGCTAAA
ATGCATGTAA CTGAAAATGA ACAGTTTTCA CGTGATTATC ATGATCCGGA AAAGCGCTCT
ATAGCTAACA GCATGAGAAT CATCTTTAAA GATGGCTCAG AAAGTGAATT AATAACTATA
GAATACCCTA TTGGTCATAG ACGGAGACGA GAAGAGGGGA TTCCCGTTTT AATGTCTAAA
TTCAAGCGTA ATCTGAGTAC AAGATTCTCT ACTGACATGG TTGAAAAGAT TATGCATGCC
ATGAGCGACA CCAATACGCT ATCATCTATG AAAGTAAGTG ATTTTATGGC CATGTGGATG
GTAAATTAA
|
|---|
| Protein sequence | MHNYVEDNVK PHYDQVIADI ADFVLNKEID SVQAYETARL CLMDTLGCGI LALNFQECTK
LMGPIVPGAT LPGGARVPGT NYELDPVQAA FNIGTMIRWL DFNDTWLAAE WGHPSDNLGA
ILAVADYLCR ENCNHGRPPI LMHDVLTAMI KAHEIQGCLA LENSFNRVGL DHVILVKVAS
AAVAAHLFGA DRDMMLRTLS QVFVDGQSLR TYRHAPNAGS RKSWAAGDAT SRAVRLALIA
KAGEMGYPSA LTAQTWGFYD VLFGNKQFNF QRPYGSYVME NVLFKLSYPA EFHAQTAVEC
AVKLHPIVKN RLEDIARIEL ITHESAIRII SKQGALYNPA DRDHCLQYMV AVGLLFGDLK
AEHYEDDVAA DPRIDALRAK MHVTENEQFS RDYHDPEKRS IANSMRIIFK DGSESELITI
EYPIGHRRRR EEGIPVLMSK FKRNLSTRFS TDMVEKIMHA MSDTNTLSSM KVSDFMAMWM
VN
|
|---|
| |