Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | lpl1314 |
Symbol | lspF |
ID | 3114401 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Legionella pneumophila str. Lens |
Kingdom | Bacteria |
Replicon accession | NC_006369 |
Strand | - |
Start bp | 1469409 |
End bp | 1470608 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637583087 |
Product | type II secretory pathway protein LspF |
Protein accession | YP_126664 |
Protein GI | 54294249 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1459] Type II secretory pathway, component PulF |
TIGRFAM ID | [TIGR02120] general secretion pathway protein F |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCGCCT ACCAATATCA AGCGCTAAAA GTGAATGGCA GCATTAGCAA AGGTGTAATA GAAGCTGATT CTGAACGTCA TGCACGTCAA TTATTGCGAG AACAAGGACT AATCCCTACT CAAGTCCAAA CATTAACCCA GCAACGTGCT GCCAGCAGCA AAGGTAAAGT TTCTGCGGCT GATTTGGCAT TACTCACGAG ACAGCTGGCA ACACTTCTGG CTGCCGGTAT TCCTGTTGAA GAATCATTGC GCGGGGTCAG CGAACAAACA GAAAAAGACA AAGTCAGAGA GCTTATTATC GGAGTTCGCT CTAAAGTATT GGAAGGGTAT GGTCTTGCTC AGGCAATGGC TCAATATCCC AATGCCTTTC CAGAACTATA CCGGGCAACA GTTGGCTCAG GCGAGCAGAC AGGGCGCCTT GATGTCGTTT TAGAAAAATT AGCTGATTAT ACTGAAAAAC AACAACAAAC TCGACAAAAA GTGCAGCAAG CCTTGATTTA CCCATTGCTC ATGATCATTG TTTCTACTGC CATTATCAGT TTTTTACTTA CTTTTGTCGT CCCTAAAATT ATTGATGTGT TTACCGAAAG TGGCCAAACA CTACCACCAA TGACGCAATT GCTTATTAAC ATGAGCCAAT TTATCAAATC TTATGGTGTG TATAGTCTAG TGACAATAAT TGTGGCTCTG ATTGGATTTA AAAAAAGCCT CAATAATATA AAAATTAAAA CAGCATGGCA TCAATTCATG CTTAAACTAC CTATCGTGTC TTATTTGGTT AAAACAATTA ATGTAGCACG ATATATTCAC ACGTTTGGAA TTCTATTTGC AGCGGGAGTC AGTGTACTTG AAACCATGCG TGTTTCTTCA AGTTTGGTAA CCAATATCGT GATGAGACAG GCTTTTGATT TAGCTACTCT ACGAGTCCGT GAAGGAAGTG GAATCAGTGA AGCCCTCAAA GAAACAAAAT TCATTAGCCC TATGGCTATC CATCTCATAG CCAGTGGTGA GAAAAGCGGC CAACTTTCAG ACATGATGGA ACGCTCGGCG TCTCATTTAG ATAATGAAGT AAACCGACTG ATTGAAACAT CCTTAACTTT ATTAGAACCT ATGGTTATTC TATTAATGGG TGCTGTTGTT TTGTTTATTG TACTTGCGAC CTTATTACCT ATTTTTTCAA TGGAACAATT AGTTGCCTGA
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Protein sequence | MGAYQYQALK VNGSISKGVI EADSERHARQ LLREQGLIPT QVQTLTQQRA ASSKGKVSAA DLALLTRQLA TLLAAGIPVE ESLRGVSEQT EKDKVRELII GVRSKVLEGY GLAQAMAQYP NAFPELYRAT VGSGEQTGRL DVVLEKLADY TEKQQQTRQK VQQALIYPLL MIIVSTAIIS FLLTFVVPKI IDVFTESGQT LPPMTQLLIN MSQFIKSYGV YSLVTIIVAL IGFKKSLNNI KIKTAWHQFM LKLPIVSYLV KTINVARYIH TFGILFAAGV SVLETMRVSS SLVTNIVMRQ AFDLATLRVR EGSGISEALK ETKFISPMAI HLIASGEKSG QLSDMMERSA SHLDNEVNRL IETSLTLLEP MVILLMGAVV LFIVLATLLP IFSMEQLVA
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