Gene lpl1247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus taglpl1247 
SymbolrpoS 
ID3114978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLegionella pneumophila str. Lens 
KingdomBacteria 
Replicon accessionNC_006369 
Strand+ 
Start bp1390104 
End bp1391129 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content40% 
IMG OID637583020 
ProductRNA polymerase sigma factor RpoS 
Protein accessionYP_126598 
Protein GI54294183 
COG category[K] Transcription 
COG ID[COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) 
TIGRFAM ID[TIGR02394] RNA polymerase sigma factor RpoS
[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGATG AAGAAGAGCC AATTAAGGAC AAGGAATTTA AAGAAGAGGA ATGGTCTGAG 
CCAGATGATG ACTCTCTGTT GTCAGAAGAG GATATTGAAC CTGATATCGA AAAAATGGAA 
GAAGAGCTTG ATGAACTTCC AGAGTTTACT GATGATGAAG CTTTTCCTTC ATTCCAGCGC 
GGGAAAAATA TTGCCAAGGC TTTAGATGCA ACTCAACTTT ACTTGGGTGA AATTGGTTTT 
TCTCCTTTGC TAACGGCTGA AGAAGAAATC CATTATGCGA CTCTTGCTTT AAAAGGTGAT 
ATGGAAGCAC GCAAGAAAAT GATTGAGTCG AATTTGCGCC TGGTGGTTAA AATAGCCAGA 
CGTTATCTTA ATAGAGGCTT ACCTCTTCTG GATCTAATCG AAGAGGGTAA CCTGGGTTTA 
ATGAAGTCTG TTGAGAAATT TGACCCCAAG CGAGGATTCC GTTTTTCAAC TTATGCGACC 
TGGTGGATTA GGCAAACTAT TGAGCGCGCA ATTATGAATC AAACGAGAAC TATCCGCCTG 
CCTATTCATG TCGTGAAAGA ACTTAATGTA TATCTCAGAG CGGCAAGACA ATTGACGCAA 
AAACTGGATC ATGAACCATC ACCGGAAGAA ATAGCGGAAA TGGTGGATAA GCCTTTGGAG 
GATGTCCAAA AATTATTGGG TTTGAATGAT AAAGTCGCCT CGGTTGATAC TCCAATTGGA 
TTTGATGAAA CCAAATCTTT ATTAGATACA ATTGCTGATG AAAACAGTTT AAATCCTGCA 
GAGCTGCTAA CCAACGAGAA TTTAAGGCAG CATATAGAAT CTCTTCTGGA TAAATTAACT 
GAGAATCAAC AGCAGGTTAT CGCAAGACGT TTTGGGTTAA GAGGTTTTGA AAAAGCGACA 
CTGGAAGACG TTGGTAAAGA AATTGATTTG ACCCGAGAAC GCGTTCGCCA AATTCAAGTT 
GAAGCTTTGA AGACACTTAG AACTTTGTTA GAGCGGGTTG GACTAACACA AGAGGATTTG 
TTTTGA
 
Protein sequence
MQDEEEPIKD KEFKEEEWSE PDDDSLLSEE DIEPDIEKME EELDELPEFT DDEAFPSFQR 
GKNIAKALDA TQLYLGEIGF SPLLTAEEEI HYATLALKGD MEARKKMIES NLRLVVKIAR 
RYLNRGLPLL DLIEEGNLGL MKSVEKFDPK RGFRFSTYAT WWIRQTIERA IMNQTRTIRL 
PIHVVKELNV YLRAARQLTQ KLDHEPSPEE IAEMVDKPLE DVQKLLGLND KVASVDTPIG 
FDETKSLLDT IADENSLNPA ELLTNENLRQ HIESLLDKLT ENQQQVIARR FGLRGFEKAT 
LEDVGKEIDL TRERVRQIQV EALKTLRTLL ERVGLTQEDL F