Gene lpl1186 details

Gene Information

• Locus tag: lpl1186
• Symbol: ribD
• ID: 3113329
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Legionella pneumophila str. Lens
• Kingdom: Bacteria
• Replicon accession: NC_006369
• Strand: +
• Start bp: 1325100
• End bp: 1326173
• Gene Length: 1074 bp
• Protein Length: 357 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 637582957
• Product: riboflavin biosynthesis protein RibD
• Protein accession: YP_126537
• Protein GI: 54294122
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0117] Pyrimidine deaminase; [COG1985] Pyrimidine reductase, riboflavin biosynthesis
• TIGRFAM ID: [TIGR00227] riboflavin-specific deaminase C-terminal domain; [TIGR00326] riboflavin biosynthesis protein RibD

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCACGAAC AGTTTCTGCT TGCAGCACTT GAACAAGCCA AACTGGGGAG AGGCTTTTGT 
GCCCCCAATC CCAGCGTTGG GGCGGTTGCT GTGCAAAATG GTAATATTAT AGCACAGGCA 
TGGCATAGAG GTGCAGGTAC ACCGCATGCA GAACAATTAT TGTTATCACA AATTCTACCC 
CAAACGCCAG GGGTTACGCT TTATGTCACG CTGGAGCCTT GTAATCATTG GGGCAAAACT 
CCCCCTTGTG TTGATGCTAT TATCAATCAT GGTATAGAGG AGGTTGTTTT TTCCTATTTT 
GACCCAAACC CCATTGTTGC CAAAAGTAAC TCCTCAGAAA AATTACGTGA ACATGGAATA 
CAAGTCAGGC ATATTCCTAT AAAGGCAATT GATGTGTTCT ATAAAAGCTA TGCTTATTGG 
ACTATGACCC ATAAACCAAG AGTCACTGTT AAAATAGCAC AAACTTTTGA TGGTAAAATT 
GGAAAGTCTG AGGGAGCTCG AGTGGTTTTG TCCAATTCTT TATGCGAACA GTTCACTCAT 
CAAATGCGTG CTGCCAGTGA TGTCATATTA ACCAGTGCCA AGACAGTTCA AATGGATAAT 
CCAAGAATGA ACGCAAGATT AGATACTGGA TTGGTAGCAA AGCCAGTTGC CATTGTTGAC 
CGCAATTTAA GTTTGTCTGA TGACACAATC ATTTTTTCGA CAGCAAAACA TTGCCACATT 
TATCATCAAC CACAAGCAAA TCAGGCAAAG ACTTATCCTA ATAGCACTCA TTATGCGATG 
CCTTTGCAAA ATGGGTTGAT GAACCTGGAG GCAATAATAA CTCATCTTGG TCAACTGGGA 
TACCATGATG TATGGGTTGA AGCGGGCGGA GCTATTTTTT CTGCGTTACA TAGTAAGGGA 
TTGGTGCATA GAACCTATTT GTATTTAGTT CCCGGCAGTT TAGGGCATCA AGCGATTTCA 
GCTTATCAAC AACAGGGGAT TTTTGAAAAA GCTCATACGG TGAGTTGGCA AGCTATGGGT 
GACAATATGA TAGCATGTTT GGATTGGCAG GAGGATGAGT GTTTACCGGA TTGA 

 

Protein sequence

MHEQFLLAAL EQAKLGRGFC APNPSVGAVA VQNGNIIAQA WHRGAGTPHA EQLLLSQILP 
QTPGVTLYVT LEPCNHWGKT PPCVDAIINH GIEEVVFSYF DPNPIVAKSN SSEKLREHGI 
QVRHIPIKAI DVFYKSYAYW TMTHKPRVTV KIAQTFDGKI GKSEGARVVL SNSLCEQFTH 
QMRAASDVIL TSAKTVQMDN PRMNARLDTG LVAKPVAIVD RNLSLSDDTI IFSTAKHCHI 
YHQPQANQAK TYPNSTHYAM PLQNGLMNLE AIITHLGQLG YHDVWVEAGG AIFSALHSKG 
LVHRTYLYLV PGSLGHQAIS AYQQQGIFEK AHTVSWQAMG DNMIACLDWQ EDECLPD