| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | lpl1044 |
|---|
| Symbol | helC |
|---|
| ID | 3115303 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Legionella pneumophila str. Lens |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_006369 |
|---|
| Strand | + |
|---|
| Start bp | 1171293 |
|---|
| End bp | 1172543 |
|---|
| Gene Length | 1251 bp |
|---|
| Protein Length | 416 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637582820 |
|---|
| Product | HelC protein |
|---|
| Protein accession | YP_126400 |
|---|
| Protein GI | 54293985 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1538] Outer membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTATT TTTCACGTCT CGTCATTTTC ATGATGATGT ACTTCGTTGT TTGCGAAGTA
CTGTCGGCTA CCCCCTTTAC TTTTAAACAG GCTTTGGACA CGGCTTATCG AAATAATCCT
GAATTGCAAG CCGAAATGGA CAAAGCAAGG GCCATGCGGG GTTACTTTAT TCAAAGTGGC
CTTTATCCCA ATCCGCAACT GACTTTAACG GCGGAGAATT TCGGTGGCTC TGGCGCCTAC
TCCAGTTATG AATCTGCGGA AACCACGTTT TCAGTCACTC AGCCGATTCC TTTAGGCCAT
CGACTTCAGT ATTTGAAAAA AGCAACCTAT GCAGACTATC TGGCGTCTCT TGCCAGCATC
AGAGTTCAGC AAACAGCGCT GTATATGGCT GTGGGTGTGG CTTATGTGGA TGCGCTATAC
GCCGGTCAAT GGCATCAAGT GACCAAAAAA CTGACTCGAC TGAATCAGGA TATTGTGGTG
GCTATTGAGC GCCGGGTTAA GGCAGGTGCT GGGGCAGAGC TGGATTTGCG ATTGGCGCAA
GTACGATTGG GCGAGGCCAA AATCCAGGAA AATAAAGCAG CACGGGACGC TTTGTTGCAG
CGAGCCAAGC TTGCGCGCTT GTTAGGTGAT GGGTTAAGAG TGGATAGGCC TTTGGTGGAT
AAAGGGTTAC CAGGTGTTTC AGTCAATTGG ACTGAATTAG TAAAAAAATT ACCGCAAAGC
CCTCAGTTAC TGCAAATGCA ACTGCAATTA CAAGCCAAGC GCAAGACGAT TACCGCTGTT
AAAAAATCCG TTTGGCCGGA TTTAAACATT CAATTGGGAG GTCGTCATTT TTCTGATGAC
GGCAGTAATG CGGCCGTTAT GTCAGCTTTT GCAGAAGTGC CAGTATATAA TCGAAATCAA
GGCAAAATCA TGACAGCAGA AGCGCAATAC ACCCAGACGG CCCATGAATT TCAAGGAACG
CGTCTTGATG TGCGTCAAAG TGTCTATGCG GCCTTTTTAC AAGCCCAGCA AAACCACTAT
GAAGCCAGTT TAGTTACGGA TTCCTTATTG CCGTTGGCAC GTAAAGCGAT AAAACTGGCT
CAAGAGGGCT ATCAAATGGG ACGTTACACG TACATTGAAT TATCAACCGC ACTCAATTCT
TTGTATGAAG AAGAGCGGCA TTACCAGCAG GCTCATGCCG ATTATCATAA AGCCTTAATT
CAGATGACAG GACTTTTAGG ACTGGATAAT TCTAAGGAGG AGAGCAAATG A
|
|---|
| Protein sequence | MRYFSRLVIF MMMYFVVCEV LSATPFTFKQ ALDTAYRNNP ELQAEMDKAR AMRGYFIQSG
LYPNPQLTLT AENFGGSGAY SSYESAETTF SVTQPIPLGH RLQYLKKATY ADYLASLASI
RVQQTALYMA VGVAYVDALY AGQWHQVTKK LTRLNQDIVV AIERRVKAGA GAELDLRLAQ
VRLGEAKIQE NKAARDALLQ RAKLARLLGD GLRVDRPLVD KGLPGVSVNW TELVKKLPQS
PQLLQMQLQL QAKRKTITAV KKSVWPDLNI QLGGRHFSDD GSNAAVMSAF AEVPVYNRNQ
GKIMTAEAQY TQTAHEFQGT RLDVRQSVYA AFLQAQQNHY EASLVTDSLL PLARKAIKLA
QEGYQMGRYT YIELSTALNS LYEEERHYQQ AHADYHKALI QMTGLLGLDN SKEESK
|
|---|
| |