| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | lpl0983 |
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| Symbol | mfd |
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| ID | 3114248 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Legionella pneumophila str. Lens |
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| Kingdom | Bacteria |
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| Replicon accession | NC_006369 |
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| Strand | - |
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| Start bp | 1104223 |
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| End bp | 1107684 |
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| Gene Length | 3462 bp |
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| Protein Length | 1153 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637582761 |
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| Product | transcription-repair coupling factor |
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| Protein accession | YP_126342 |
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| Protein GI | 54293927 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1197] Transcription-repair coupling factor (superfamily II helicase) |
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| TIGRFAM ID | [TIGR00580] transcription-repair coupling factor (mfd) |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATACAA AAACGCTACT TTACCAACCC ACAAAAAATA AACAAATATG GGGGCAACTC
TATGGTAGCA GCCTGGCACT TGCTTTAGCT GAATATTGCC AACAAACACC CGGAATCAAA
TTACTTATTA CGCAAGACAA CCTATGCGCC AGTCAGTTGC AGGATGAACT ACAATTTTTT
CTAAACCCGA ACCAAAATAC CCAGGAGTTA TTATTTTTTC CCGACTGGGA AACCTTGCCT
TATGATCAAT TCTCTCCTCA TCAAGATATT ATTTCAGAAA GACTTTACAC CTTAAGCAGA
GTTCAACAAA TTACCAATGG AATCATCATT TCTTCAGCCA GCACTTTAAT GCACAGGCTT
TCTCCTCCAG AGTTTTTAAA TCAATACGCT TTAATGCTTA AAGAGGGGCA AAAGCTTGAT
CTGAACTCGT TCAGGAATCA GTTGCAACAA GCAGGATACC ATTGTGTTAA TAAAGTGCTT
GAACATGGTG AATACGCACT ACGTGGATCT ATTATTGACG TGTATCCGAT GGGTAGTGGT
TTACCTTTCC GTATCGAGCT ATTTGATGAT GAAATTGAAA GTCTCAGAGA ATTTGATCCG
GAAACACAAC GCACAATAGA AAAAATCAAT CAAATCCATT TGTTACCTGC TCGTGAATTT
CCATTAAATG AACAAAGCCA ATTACATTTC CGACGAGCTT TCAGAGAGTC TTTTCCTGGA
AATCCCAGCC ATTGCCCAAT ATACGAAGCA ATTAGTAACA ATCAATTTCC ATCTGGCATA
GAATATTATC TGCCCTTGTT TTTTGATAAA ACCGTTACCT TTTTTGATTA TCTGCCAGCC
AATGCCAAAA TTTGTTTAAT TGAAGAAATC CAGGAGAATG CTGAGAGATT CTGGCGAGAA
TTAAATGAAC GCTATGAACA ACGGCGTCAT GATGTCAGCC GCCCTATTTT ACCCCCAGAT
AATTGCTTTA TTAATCCCAC CGAGTTATTA ACTAAAGCAA ACCATTATGA ACAAGTACGC
CTGTATCACA AACCTTCCGA AAAAAAAGGA GCCCTAAATT TCAATATTGC CAAAGCTCCA
CAACTACCCA TTGACAGGAA AAATATTGAG CCACTCTGCC AATTAAGTGA GTATTGCTCT
GATCCAACTC GACGCTATCT AATTGTTGTT GAAAGCGCAG GGCGTCGCGA AGTATTACTG
GATCTGCTTA AATCAAGCCA TATCATTCCA AAAACACAGA ACTCATGGTT AGATTTCATT
TACGATGAAT CCCCCATCAA TATAACTACT GGCCCATTGA TTTATGGCTG TGAATTAACC
GACAAACAAA TTGTGATCAT CGTTGAGTCG CAATTATTTG GTGAACAAAG CACACCTCAA
CGCCGAAGTA CTCAAAAATC AGTTGACCCT GACTTAATCA TACGAGATAT GGCCGAACTT
CGATTGGGCG CCCCTGTTGT ACATCTTCAA TTTGGAGTAG GTCGCTATCA AGGTTTGCAA
TACATCGACT CCAATGGTAC CCCCAGTGAG TTCCTCGTCC TTGCTTACGC AGGGGATGAC
AAAATCTATG TGCCAGTCAC TTCTCTGCAT ATGATAAGCC GGTATACTGG TGTGGACAGT
GAACACGCCC CTTTGCATAA ACTGGGTTCT GATCAATGGC AAAAGGAAAA AAAGAAAGCG
GCCGAGAAGA TTCATGATGT GGCAATTGAA TTATTGGATC TCTATGCTAA AAGAGAAGCC
CAGCCAGGGC ACCAATACGA TTTCAATCAA TCCGAATATA TAAAATTTGC CAGTGGCTTC
CCCTTTACAG AAACACCAGA TCAACTTCAG GCTATTGAAC AAATTATTAA GGACATGCAA
TCACCAAGAC CGATGGATCG CCTAATCTGT GGTGATGTAG GATTTGGCAA AACCGAAGTC
GCCATGCGTG CTGCATTCGT AGCTGTACAA AATGGAAAAC AAGTCTGTAT CCTTGCTCCA
ACTACCTTGC TTGCAGGACA ACATTTTGAG TCATTTCGCG ATAGATTCGC AGAGTTTCCT
GTTAATATTG AATTATTATC CCGCTTTCGC AGTAATAAAG AGTCCGAAGC AGTCCTTGCC
GCATTGCAAT CAGGTAAAGT AGATATTGTA ATTGGAACCC ATAAATTATT CCAAAATAAT
ATTTCTTTCA AAAACCTGGG ATTACTGATT ATTGATGAAG AACATCGATT TGGAGTGAAA
CAAAAGGAAC ATATTAAATC GCTTCGAACT CATGTTGATA TTTTATCCAT GACTGCTACT
CCAATTCCCA GAACATTGAA CATGGCAATG GCGGGAATCA GAGATATTTC ACTTATTGCA
ACACCGCCTG CCAAGCGTTT GGCAATTAAA ACATTTTGGC AAGAAAAAAA TGATCTCACC
ATACGAGAAG CGATATTGCG TGAAATATTA AGGGGAGGGC AGGTATTTTA CCTGCACAAC
AATGTACAAA CTATAGAAAG AGTTTGCCAG GATCTGGAAG CTTTAGTGCC CGAGGCAAAA
ATTCAAAGCG CGCATGGGCA AATGCGAGAA AGGCAATTAG AGCGCATCAT GTCTGATTTT
TATCATCACC GATTTAATGT CCTGGTTTGC ACAACCATCA TTGAAACAGG GATCGATATT
CCAACCGCCA ATACCATTAT TATCGATCGT GCCGATAAAT TTGGATTAGC CCAGCTGCAT
CAATTACGTG GTCGTGTTGG ACGCTCTCAT CATCAAGCCT ACGCTTACTT ATTAACTCCC
AATGAAAAAC TGTTAACGCC AGATGCAGTG AAACGTCTCG AAGCCATTGT GTCTTTAGAA
GATTTGGGAG CAGGATTCAC CTTGGCAACA CACGATCTGG AAATTCGTGG AGCAGGTGAA
CTCCTTGGTG AAGAACAAAG TGGTAATATG CATGCCATAG GATTTAATTT ATTTATGGAA
ATGCTTGACC GTGCCGTTAA CGATTTAAAG GCAGGCAAAA CTCCTGAATT GTCAGCACCC
ATGCATCAAG GACCTGAAAT TGACTTGAGA ATTAGCGCGA TTATCCCCGA AGATTACATA
GGTGATATAC ACAACAGACT CATCATGTAT AAAAGAATTG CTAATGCAAA AACTACCCAA
CAGCTTAGAG AACTACAAAT AGAACTGATA GACCGGTTTG GTTTACTCCC GCAACCAGTC
AAACATCTGT TTTTGATTAC TGAATTAAAG TTAAAAGCGG AACAGCTCGG CATACAAAAA
ATCAGTGCCA GTGCTCAACA AGGTAAATTG GATTTTAGTG AAAAACCATC AATTGACCCT
GGAACACTGA TTAGCTTAAT ACAAGTACAT GCCAAACGCT ATCAAATGGA AGGACCGCAA
CGTCTGCGCT TTACTTTAGA CAGCACGTCA GCAGAGGAAC GAATATTTGA AATCAGTTCT
TTATTAAATA AACTGTCTCC TCATTCCCAA ACGATTGACT GA
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| Protein sequence | MNTKTLLYQP TKNKQIWGQL YGSSLALALA EYCQQTPGIK LLITQDNLCA SQLQDELQFF
LNPNQNTQEL LFFPDWETLP YDQFSPHQDI ISERLYTLSR VQQITNGIII SSASTLMHRL
SPPEFLNQYA LMLKEGQKLD LNSFRNQLQQ AGYHCVNKVL EHGEYALRGS IIDVYPMGSG
LPFRIELFDD EIESLREFDP ETQRTIEKIN QIHLLPAREF PLNEQSQLHF RRAFRESFPG
NPSHCPIYEA ISNNQFPSGI EYYLPLFFDK TVTFFDYLPA NAKICLIEEI QENAERFWRE
LNERYEQRRH DVSRPILPPD NCFINPTELL TKANHYEQVR LYHKPSEKKG ALNFNIAKAP
QLPIDRKNIE PLCQLSEYCS DPTRRYLIVV ESAGRREVLL DLLKSSHIIP KTQNSWLDFI
YDESPINITT GPLIYGCELT DKQIVIIVES QLFGEQSTPQ RRSTQKSVDP DLIIRDMAEL
RLGAPVVHLQ FGVGRYQGLQ YIDSNGTPSE FLVLAYAGDD KIYVPVTSLH MISRYTGVDS
EHAPLHKLGS DQWQKEKKKA AEKIHDVAIE LLDLYAKREA QPGHQYDFNQ SEYIKFASGF
PFTETPDQLQ AIEQIIKDMQ SPRPMDRLIC GDVGFGKTEV AMRAAFVAVQ NGKQVCILAP
TTLLAGQHFE SFRDRFAEFP VNIELLSRFR SNKESEAVLA ALQSGKVDIV IGTHKLFQNN
ISFKNLGLLI IDEEHRFGVK QKEHIKSLRT HVDILSMTAT PIPRTLNMAM AGIRDISLIA
TPPAKRLAIK TFWQEKNDLT IREAILREIL RGGQVFYLHN NVQTIERVCQ DLEALVPEAK
IQSAHGQMRE RQLERIMSDF YHHRFNVLVC TTIIETGIDI PTANTIIIDR ADKFGLAQLH
QLRGRVGRSH HQAYAYLLTP NEKLLTPDAV KRLEAIVSLE DLGAGFTLAT HDLEIRGAGE
LLGEEQSGNM HAIGFNLFME MLDRAVNDLK AGKTPELSAP MHQGPEIDLR ISAIIPEDYI
GDIHNRLIMY KRIANAKTTQ QLRELQIELI DRFGLLPQPV KHLFLITELK LKAEQLGIQK
ISASAQQGKL DFSEKPSIDP GTLISLIQVH AKRYQMEGPQ RLRFTLDSTS AEERIFEISS
LLNKLSPHSQ TID
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