Gene lpl0892 details

Gene Information

• Locus tag: lpl0892
• Symbol: ccmF
• ID: 3113518
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Legionella pneumophila str. Lens
• Kingdom: Bacteria
• Replicon accession: NC_006369
• Strand: +
• Start bp: 1003901
• End bp: 1005853
• Gene Length: 1953 bp
• Protein Length: 650 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 637582669
• Product: cytochrome C-type biogenesis protein CcmF
• Protein accession: YP_126251
• Protein GI: 54293836
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG1138] Cytochrome c biogenesis factor
• TIGRFAM ID: [TIGR00353] c-type cytochrome biogenesis protein CcmF

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATAGCGG AATTAGGGCT GTTTTTTTTG ATTTTGGCTT TAGTGGCTTC TTTGATGTTA 
GCTTTGATCC CATTGGCGGG TTTGCAATTC AATCGGAAAG ACTGGATTGA TTCCTCCAGG 
AATTATGTCG TACTGCAATT TTTATTTGTT GCATGTGCTT ACCTATGTCT CACGGCCTGT 
TTTTTGATGG ATGATTTTTC GGTGAACTAT GTGCTGAATA ACTCCAGCTT ATTGCTCCCA 
TGGTTTTATA AATTTTGTGC TGTGTGGGGT GGGCATGAAG GTTCCATGCT GTTATGGGTC 
GCTATCCTTA GTTTTTGGAT GATCCTGGTT TGTTTTTTTA GCTCAAGCCT TGATACGGAA 
ATGCGCGCTC GGGTATTAGT TATTTTAGGT TGGCTGAGCA TTGGCTTTAT TCTTTTTTTG 
TTAATGACTT CCAATCCTTT CTTGCGCCAA TTTCAAGTAT TGAATACACA GGGCCGTGAT 
CTGAATCCAT TGCTGCAAGA TCCTGGCTTT TTATTCCATC CTCCTATGTT GTACATGGGA 
TATGTAGGGT TTTGTGTCGC TTTTGCTTTT GCTATTGCCG CCTTGTGGGC AGGGAAAGTA 
GAAACCAGTT GGTCTAAATG GACCAGACCC TGGACTCTGG CTGCCTGGTG TTGTTTAACC 
GCGGGAATTA CTTTAGGCAG TTGGTGGGCT TATAGAGAAT TAGGTTGGGG TGGTTGGTGG 
TTTTGGGATC CTGTAGAAAA CGCTTCTTTT ATGCCCTGGC TGGTTGGTAC GGCACTATTG 
CATTCTTTGG CAGTTACAGA GCAACGCCAG CAATTTAAAG CGTGGACCAT GTTGCTTGCA 
ATCGCTGCTT TTTCTTTAAG TTTAATCGGT ACTTTTCTTG TTCGCTCTGG AGTTTTAACT 
TCAGTCCATG CCTTTGCGGT TGATCCTCAG CGGGGATTAT ATATTCTGGG ATTTTTGTTA 
TTCGTCATTG GGGGTTCTTT AACATTGTTT CTTTTCAGAG CCCAAACCTT GCAAGTCAAT 
AAACATCCTG GCTTATTATC CCGAGAAAGT GCGTTGTTAT TAAATAATGT GTTTTTAGTG 
GTTATTATGC TGACGGTATT AATGGGCACG GTTTATCCAT TGCTGGTGGA AGGGTTAGGG 
TTAGGTAAAT TATCCGTTGG AGCGCCCTAT TTTAATGCGG TATTTGTCCC ATTAATGATT 
CCTTTATTGT TGCTAATGGG GTTAGGTGTC CGTTTGAAAT GGCAGAATGA TTGTTGGCGG 
GATGTCTTCA GAAAGCTAAA TCGTATTTTT TTGCTTAGTC TGATATTGCC TGTCATTTTA 
CTATTCTGTA CCTCAACTGA AATACACCTT ACAGCCCTTT TGGGATTAAT TTTGGCATTC 
TGGGTTTTGT TGAGTACTGT TAATGCGGCG TATCACAAAG TCAGGGATAG AGAGATGGCG 
GGAGTTGGAC AAGCTTATTG GGGGATGGTT TTGGCTCATT GTGGTGTTGC AGCAACAGTG 
ATTGGCATTG CTGTTTCTTC AGCTTATGGC GTACAAGATG ATGTACGTAT GTCTCCTGGC 
AAGCAAGTGA ATCTGCTGGA TTATCAGATT GGATTCATTA ATCAAACTCC GTTGAATGGC 
CCAAATTACA AAGGGACAAG GGCTGAGTTT TCAATACAAT ATCAGAATAA AACTAGGCAA 
ATTTTTCCTG AAAAAAGAGT GTATACCATT GGACAAATGC CAATGACTGA GTCTGCGATT 
GATGTGACTC CTTTTCGAGA TATTTATATT GCTTTGGGGG AGCCACTGTC TGAGGATGCT 
TGGTCGGTAC GTATTTATTA TAAACCGTTG GTCCGCTGGA TTTGGGCTGG CGGATTTATG 
ATTTTAGCCG GAGGTGTTTT GGCATTAACA GATAGAAGGT ATTACAGAAA AAGGCAAGTA 
ACGGTAATGT CAGGGCGGGA GATCAAGATA TGA 

 

Protein sequence

MIAELGLFFL ILALVASLML ALIPLAGLQF NRKDWIDSSR NYVVLQFLFV ACAYLCLTAC 
FLMDDFSVNY VLNNSSLLLP WFYKFCAVWG GHEGSMLLWV AILSFWMILV CFFSSSLDTE 
MRARVLVILG WLSIGFILFL LMTSNPFLRQ FQVLNTQGRD LNPLLQDPGF LFHPPMLYMG 
YVGFCVAFAF AIAALWAGKV ETSWSKWTRP WTLAAWCCLT AGITLGSWWA YRELGWGGWW 
FWDPVENASF MPWLVGTALL HSLAVTEQRQ QFKAWTMLLA IAAFSLSLIG TFLVRSGVLT 
SVHAFAVDPQ RGLYILGFLL FVIGGSLTLF LFRAQTLQVN KHPGLLSRES ALLLNNVFLV 
VIMLTVLMGT VYPLLVEGLG LGKLSVGAPY FNAVFVPLMI PLLLLMGLGV RLKWQNDCWR 
DVFRKLNRIF LLSLILPVIL LFCTSTEIHL TALLGLILAF WVLLSTVNAA YHKVRDREMA 
GVGQAYWGMV LAHCGVAATV IGIAVSSAYG VQDDVRMSPG KQVNLLDYQI GFINQTPLNG 
PNYKGTRAEF SIQYQNKTRQ IFPEKRVYTI GQMPMTESAI DVTPFRDIYI ALGEPLSEDA 
WSVRIYYKPL VRWIWAGGFM ILAGGVLALT DRRYYRKRQV TVMSGREIKI