Gene lpl0664 details

Gene Information

• Locus tag: lpl0664
• Symbol: pilE
• ID: 3114178
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Legionella pneumophila str. Lens
• Kingdom: Bacteria
• Replicon accession: NC_006369
• Strand: -
• Start bp: 717611
• End bp: 718060
• Gene Length: 450 bp
• Protein Length: 149 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 637582443
• Product: type-IV pilin
• Protein accession: YP_126026
• Protein GI: 54293611
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG4968] Tfp pilus assembly protein PilE
• TIGRFAM ID: [TIGR02532] prepilin-type N-terminal cleavage/methylation domain

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTCAGTC ATATAGATTT TATGAAGAAT AGCCGTATGA AACAATCGGC GTTTACCCTG 
GTTGAAGTTC TGATCAGCAT GGTCATTATG GGAATTCTGG TTTCAATTGC CTATCCATCC 
TATTTACAAT ATATCCAAAA ATCCCGTCGT GCCGATGCTC ACGCCACATT GACACAAGAT 
CAAATTATTT TAGAACGCTG CTACTCACAG AATTTTTCTT ATGCTGCGGC GTGTGGCGCC 
TTACCAGCGT TTCCTCAAAC AACTCCGAAC GGATACTATA CTATCAATAT TTCAAACCTG 
ACAGCCACAA CGTATACCTT AACTGCAACC CCTGTTGGAA CTCAAGCCAA AGATACCGAG 
TGTGCCAGCA TGTCAATTAA CCAGGCCAAT GTAAAAACAG CAGTAGATTC CTCTGCCAAT 
GCGCAACCAG AATGCTGGAA TCCCGGTTAA 

 

Protein sequence

MLSHIDFMKN SRMKQSAFTL VEVLISMVIM GILVSIAYPS YLQYIQKSRR ADAHATLTQD 
QIILERCYSQ NFSYAAACGA LPAFPQTTPN GYYTINISNL TATTYTLTAT PVGTQAKDTE 
CASMSINQAN VKTAVDSSAN AQPECWNPG