| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | lpl0363 |
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| Symbol | rpoC |
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| ID | 3115328 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Legionella pneumophila str. Lens |
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| Kingdom | Bacteria |
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| Replicon accession | NC_006369 |
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| Strand | + |
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| Start bp | 423306 |
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| End bp | 427511 |
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| Gene Length | 4206 bp |
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| Protein Length | 1401 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637582140 |
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| Product | DNA-directed RNA polymerase subunit beta' |
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| Protein accession | YP_125730 |
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| Protein GI | 54293315 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02386] DNA-directed RNA polymerase, beta' subunit, predominant form |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGACT TACTTGGTAT TCTTAAGCAA CAAGGTCAAA GTGAAGAATT TGATGCAATA
AAAATTGCAC TGGCGTCACC TGAATTAATT CGATCATGGT CCTACGGCGA AGTTAAAAAA
CCTGAAACAA TCAACTACAG GACATTTAAG CCTGAAAGAG ATGGTTTGTT TTGTGCTAAA
ACTTTTGGTC CGGTTAAAGA TTATGAGTGT TTGTGTGGAA AGTACAAGCG ACTAAAGCAT
CGTGGTGTTA TTTGCGAGAA GTGTGGGGTT GAATTGGCTC TTGCCAAAGT GAGACGAGAA
AGGATGGGGC ATATCGAACT CGCTAGCCCA GTCGCACACA TATGGTTCTT AAAATCCTTA
CCATCAAGAA TTGGTTTGCT CCTCGATATG ACACTAAGAG ATATCGAGAG AGTACTCTAT
TTTGAGGCTT TTGTCGTTGT TGATCCTGGA ATGACAGAAC TTGAAAGAGG GCAACTACTT
AATGACGAAG CCTATCTTGA TGCGATGGAA CAGTATGGAG ATGAGTTTGA CGCGCGTATG
GGCGCAGAAG CAATTCGTGA TTTATTGCGC CAAATTGATC TGGAAGATGA AATTAGAAAT
TTACGTGAAG AGCTTCCAAC AACTAACTCT GAGACGAAGA TTAAAAAAAT CACCAAAAGA
CTCAAGTTAT TAGAAGCTTT TTACGAGTCA GGAAATAAAC CAGAATGGAT GATCATGGAT
GTACTTCCAG TGCTTCCACC CGATTTGAGA CCATTGGTTC CGCTAGATGG TGGACGTTTT
GCTACTTCAG ACTTGAATGA TTTATACAGG CGCGTCATTA ATAGGAATAA CCGACTAAAA
CGCCTGCTGG ATCTGAATGC GCCTGACATT ATCGTTCGTA ACGAAAAACG AATGCTGCAA
GAATCCGTAG ATGCTTTGCT TGATAACGGC AGAAGGGGTC GTGCCATCAC TGGTACAAAT
AAGAGACCTC TTAAATCACT GGCTGATATG ATTAAAGGAA AACAGGGTCG TTTCAGACAA
AACCTCTTAG GTAAGCGTGT CGACTACTCT GGGCGTTCAG TTATTGTAGT TGGACCAACT
TTAAAATTGC ACCAATGCGG ATTGCCTAAA AAAATGGCGT TGGAATTATT CAAGCCATTT
ATATTTTCCA AATTGGAATT TAGAGGTTTG GCAACTACTA TCAAAGCAGC CAAGAAAATG
GTCGAAAGAG AGGAATCGGT TGTTTGGGAT ATATTAGATG ATGTTATTAG GGAACATCCT
ATCCTTTTAA ACCGTGCTCC TACTTTGCAT AGATTAGGTA TTCAAGCATT TGAGCCTGTT
TTAATTGAAG GTAAAGCGAT CCAGCTCCAT CCTTTGGTAT GTACAGCATA CAACGCTGAC
TTCGATGGAG ACCAAATGGC TGTGCACGTG CCCTTGACAC TGGAAGCGCA GCTGGAAGCT
CGTTCATTGA TGATGTCTAC AAACAATATA TTATCTCCAG CCAGTGGTGA GCCGATTATT
GTCCCCAGTC AGGACGTCGT CCTTGGGTTA TACTATTTAA CAAGAGAAAA GGTTAATGCA
TTAGGCGAAG GAAAAATATA TTCAAGTGCT CAGGAAGCGC AAAATTTCTA TGAAGCAGGT
CATTTGGATA TCCATGCAAA AATTAAAATT CGTATGCCTA AAGAAGATGG TGAAACTGGA
TATCATTTAG TTGAGACAAC AGTCGGACGC GCTATTTTAG CTGAGATTTT GCCTAAAGGA
ATGCCATTTG ACTATATAAA CCGTACAATG ACAAAAAAGG TTATCTCAAA AGTAATAGAC
AGCTGCTACC GCAAATTCGG CTTGAAAGAA ACAGTCATTT TTGCTGATCA GTTAATGTAT
ACCGGGTTTA AATACGCCAC ACGATCTGGA GCATCCATAG GTATTGAAGA CATGGAAATA
CCAGATGATA AGGCCAGTAT TATTGAACAC GCCGATAATG AAGTAAGAGA AATCGAATCT
CAATTCAGAT CGGGTTTGGT AACGAATGGT GAACGATACA ACAAGGTAAT TGATATTTGG
TCAAGAACTA ATGAATTAGT TGCCAAATCA ATGATGTCTA AAATTGCAAC AGAAGAAGTC
GCTGATGCAA AGGGCAACAA AGTAAGACAA GAATCATTTA ACCCAATTTT CATGATGGCT
GATTCTGGAG CTAGAGGTTC TGCTGCTCAG ATACGACAGC TTGCCGGGAT GCGAGGTTTG
ATGGCAGCTC CAGATGGCTC AATTATTGAA ACGCCTATCA CTGCAAACTT CCGCGAAGGT
TTGAATGTAT TCCAGTACTT TATTTCTACA CACGGAGCTC GTAAGGGTTT GGCAGATACG
GCGTTAAAGA CAGCAAACTC AGGGTATCTG ACACGACGAT TGGTAGATGT TGCGCAGGAT
GTTGTTATTA CCGAAGATGA TTGTGGTACT GATACTGGTA TTCTAATGCA ACCACTGATT
GAAGGTGGTG ATATTGTTGA GCCTTTGCAT GAACGCGTCC TTGGGCGGGT GGTTGCTTCA
GATGTCTATA TTCCTACTCA AACTGAACCA GTAGTCAAGG CTGGAACTTT ACTGGATGAA
GAATGGGTTG AAAAATTAGA GAAGCATGGG GTAGACCAGG TTATGGTCAG GTCACCAATC
ACTTGTCAAA CGAGATTTGG TCTTTGCGCA AAATGCTATG GTAGAGATCT TGCTCGTGGG
CATCTTGTCA ACACAGGTGA AGCAGTTGGT ATTATCGCAG CACAATCAAT CGGTGAGCCA
GGAACACAGT TAACCATGCG TACCTTCCAC ATTGGAGGTG CTGCATCAAG GGCAACAGCT
GCGAATAATA TTCAAATTAA AACGAAAGGG GTTATTCGGT TACATAATAT AAAGACCGTA
ACTCATGAGA ATAAAAACCT GGTGGCAGTT TCTCGCTCAG GTGAGGTAAC TATTGTTGAT
GAGTTCGGAC GAGAAAGGGA GCGATATAAA GTTCCTTATG GTGCAGTAAT TTCAGCACAG
GATAATTCTC CTGTTGAAGC TGGTCAGGTT ATTGCAACGT GGGATCCTCA TACGCATCCT
GTTATTTCTG AAGTGTCAGG GCGTTTGAAG TTTGTTGATC TCATTGATGG TATTACAATG
AATAGGCAAA CTGATGAATT AACCGGATTA AGTAATATTG TAATAATTGA TGCCAAACAA
CGGAGTGCTG CAGGTCGAGA TTTGCGTCCA ATGGTAAAAT TAGTTACAGA TGAAGGGGAT
GACATATATC TTGCTGGAAC CAATGTCCCG GCACAATATT ATCTACCTGT CGATGCCATT
GTAAACTTTG AAGATAGAAG TCTGGTGGGA ATAGGAGATG TTATTGCCCG TATTCCGCAA
GAACGCTCTA AAACTCGTGA TATTACCGGA GGTTTACCAA GAGTAGCGGA CTTATTTGAA
GCCAGAAAAC CAAAGGATTC TGCAGTAATG GCAGAAGTAT CAGGATTGGT TAATTTTGGT
AAAGAAACCA AAGGTAAGCG ACGCTTGATT ATCAACGTAT CAGAAGATCA ATGTCATGAA
GAGCTTATTC CTAAATGGCG TCATATTTCA GTGTTTGAAG GCGAGCACGT AGAGCGTGGT
GAAATCATCG CAGAGGGTGC ACTTAATCCT CATGATATAT TGCGCTTGTT AGGTGTTGGA
GCGCTGGCTA ATTACATTGT AAATGAGGTC CAGGACGTCT ATCGTTTACA AGGTGTGAAA
ATTAATGATA AACACATTGA AGTAATTGTC AGACAAATGC TACGTAAGAG AGTTATTACT
TTCGCTGGTG ACTCGAAATT CCTCGTAGGA GAGCAAGTAG AAGAGAGCGC TATGCTTCAG
GAAAATGATA AACTTCTGGC TGAAGGAAAG CAGATTGCGC GAGGTACTCC TATTTTACTA
GGTATCACAA AAGCTTCATT AGCTACAGAA TCGTTTATAT CAGCCGCTTC ATTCCAAGAG
ACAACCAGAG TCTTGACTGA AGCAGCAGTA AGCGGAAAAG TTGATGAATT GCGTGGTTTA
AAAGAAAACG TGATGGTAGG TCGCCTAATT CCAGCAGGAA CAGGTTATAC TTATCATCAA
AGCCGAAAGG CAAAGAGAGC AAGGGTTGCA GCAGGCGGAG ACAGTTCAGC AACACACACA
GTTACTGCAA GTGATGTTGA ACACGCGTTG AGTGAAGCAT TAAACGCGGA TAATCATGAA
CATTAA
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| Protein sequence | MSDLLGILKQ QGQSEEFDAI KIALASPELI RSWSYGEVKK PETINYRTFK PERDGLFCAK
TFGPVKDYEC LCGKYKRLKH RGVICEKCGV ELALAKVRRE RMGHIELASP VAHIWFLKSL
PSRIGLLLDM TLRDIERVLY FEAFVVVDPG MTELERGQLL NDEAYLDAME QYGDEFDARM
GAEAIRDLLR QIDLEDEIRN LREELPTTNS ETKIKKITKR LKLLEAFYES GNKPEWMIMD
VLPVLPPDLR PLVPLDGGRF ATSDLNDLYR RVINRNNRLK RLLDLNAPDI IVRNEKRMLQ
ESVDALLDNG RRGRAITGTN KRPLKSLADM IKGKQGRFRQ NLLGKRVDYS GRSVIVVGPT
LKLHQCGLPK KMALELFKPF IFSKLEFRGL ATTIKAAKKM VEREESVVWD ILDDVIREHP
ILLNRAPTLH RLGIQAFEPV LIEGKAIQLH PLVCTAYNAD FDGDQMAVHV PLTLEAQLEA
RSLMMSTNNI LSPASGEPII VPSQDVVLGL YYLTREKVNA LGEGKIYSSA QEAQNFYEAG
HLDIHAKIKI RMPKEDGETG YHLVETTVGR AILAEILPKG MPFDYINRTM TKKVISKVID
SCYRKFGLKE TVIFADQLMY TGFKYATRSG ASIGIEDMEI PDDKASIIEH ADNEVREIES
QFRSGLVTNG ERYNKVIDIW SRTNELVAKS MMSKIATEEV ADAKGNKVRQ ESFNPIFMMA
DSGARGSAAQ IRQLAGMRGL MAAPDGSIIE TPITANFREG LNVFQYFIST HGARKGLADT
ALKTANSGYL TRRLVDVAQD VVITEDDCGT DTGILMQPLI EGGDIVEPLH ERVLGRVVAS
DVYIPTQTEP VVKAGTLLDE EWVEKLEKHG VDQVMVRSPI TCQTRFGLCA KCYGRDLARG
HLVNTGEAVG IIAAQSIGEP GTQLTMRTFH IGGAASRATA ANNIQIKTKG VIRLHNIKTV
THENKNLVAV SRSGEVTIVD EFGRERERYK VPYGAVISAQ DNSPVEAGQV IATWDPHTHP
VISEVSGRLK FVDLIDGITM NRQTDELTGL SNIVIIDAKQ RSAAGRDLRP MVKLVTDEGD
DIYLAGTNVP AQYYLPVDAI VNFEDRSLVG IGDVIARIPQ ERSKTRDITG GLPRVADLFE
ARKPKDSAVM AEVSGLVNFG KETKGKRRLI INVSEDQCHE ELIPKWRHIS VFEGEHVERG
EIIAEGALNP HDILRLLGVG ALANYIVNEV QDVYRLQGVK INDKHIEVIV RQMLRKRVIT
FAGDSKFLVG EQVEESAMLQ ENDKLLAEGK QIARGTPILL GITKASLATE SFISAASFQE
TTRVLTEAAV SGKVDELRGL KENVMVGRLI PAGTGYTYHQ SRKAKRARVA AGGDSSATHT
VTASDVEHAL SEALNADNHE H
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