| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | lpl0362 |
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| Symbol | rpoB |
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| ID | 3115890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Legionella pneumophila str. Lens |
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| Kingdom | Bacteria |
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| Replicon accession | NC_006369 |
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| Strand | + |
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| Start bp | 419111 |
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| End bp | 423217 |
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| Gene Length | 4107 bp |
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| Protein Length | 1368 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637582139 |
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| Product | DNA-directed RNA polymerase subunit beta |
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| Protein accession | YP_125729 |
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| Protein GI | 54293314 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGTTG CAGAAGCTAA ACCTCAATAT TCGCATGCTG AGAAAAAACG ATTTCGCAAA
AGCTTTGGTA AGCAGACAGA TATAATGCCA ATACCGAATC TGCTTGAAAT TCAACTTAAA
TCCTACAGGG ATTTTCTTCA AACTGATACT AAATTAAGCG AACAACTGAA TACGGGATTG
CATGCTGCAT TTTCTTCTGT ATTTCCTATC GAAAGCTTTT CTGGTAATGC AAGACTTGAA
TACGTCGGAT ACAAGCTTGG AGAGCCTGCA TTTGATGTTC GCGAATGCAA ACTACGAGGG
CTAACTTACT CAGCTCCTCT AAGAGTCAAG ATCAGACTCG TTGTGCTTGA TAAAGATGCA
AGCGATGATC CTAAGCCTAT AAAGGATATT AGAGAGCAAG ATGTTTTTAT GGGGGAAATT
CCCCTAATGA CTGACGTTGG TACGTTTGTG GTCAATGGAA CGGAACGTGT TGTTGTTTCA
CAATTACATC GTTCTCCTGG AGTTATATTT GAACATGACA AGGGAAAAAC TCACTCTTCA
GGTAAATTGC TCTATTCCGC ACGAATAATA CCTTATCGTG GTTCATGGTT AGACTTTGAA
TTCGATCCTA AAGATTGCGT TTATGTACGT ATTGACAGAC GTCGTAAACT GCCAGTGACC
ATTTTGCTCA GAGCATTGGG CTACGAAGCA GAAGATATAT TAAACGAATT TTTTGAAACA
ACTTGTTGTC ATTTAAAAAA TGGCGAATAC CACATCGATT TAATTCCACA GCGTTTGCGT
GGTGAAATCG CTTCATTCGA TATTCATGTT CCTGAAACTG GAGAGCTTAT CGTAGAGCAA
GGTCGTCGAA TTACCGCAAG ACATATAAAG CAAATGGAAA AAAGCCAAAT GCAGGATCTA
GTGGTACCAA GAGACTATTT AATTGGAAAA ACATTAGCAA AAAATATTAT TGATACCTCA
ACCGGTGAAT TTCTGGCTCA AGCGAATGAT GAGATAACGG AAGAGCTTTT AGATGCTATG
GCTAGCCATG GTATTTTACA AATTGATATG ATCTATACTA ACGATTTGGA TCATGGTTCT
TACATATCGG ATACATTAAA GATTGATCCC ACAGGATCAC AACTAGAAGC ACTCGTTGAA
ATTTATCGCA TGATGCGCCC TGGAGAGCCT CCTACAAAGG AAGCTGCTGA GGCACTATTT
AAAAATCTAT TCTTTGTTGA AGAAAGATAT GATCTATCTG CTGTTGGCAG AATGAAATTT
AATCGTCGGG TAGGAATTAA GAGTGACGAA GGCCCAGGCA CTTTAACGAA GGAAGACATT
TTATCTGTCA TTAAAACACT GATAGATATT CGAAATGGAA TAGGGATGGT TGATGATATC
GATCATCTAG GAAATCGTAG GGTAAGAAGT GTTGGTGAAA TGACCGAAAA TCAGTTTAGA
GTAGGTCTTG TTCGTGTTGA ACGTGCTGTT AAAGAGCGCT TAAGTTTGGT TGAATCTGAA
AATCTGATGC CACAGGACTT AATTAACGCA AAACCGGTGT CCGCCGCAAT TAAAGAGTTT
TTTGGATCCA GTCAGTTATC ACAGTTTATG GATCAAGTGA ATCCATTATC TGGTGTTACG
CATAAAAGAC GTGTATCGGC TCTTGGGCCA GGTGGTTTAA CACGTGAGCG TGCTGGATTT
GAAGTCCGTG ACGTGCATAC AACACACTAT GGTCGTGTGT GCCCAATTGA AACGCCTGAA
GGACCAAATA TTGGTCTAAT CAATTCACTG TCAGTTTATG CAAGAACTAA CGAATATGGA
TTTATTGAAA CTCCTTGTCG AAAGGTTGTT AATGGGCGTG TGACAGATGA AGTTGAATAC
CTATCGGCTA TTGAGGAAGT TGATCAATAC ATTGCACAAT CTAATGTTGA ATTAGACGCA
CAAGGAAATA TTCTTGCTGA CTTAGTTCCT TGCAGACATC AAAATGAATT TTCACTGACT
ACTCCGGATA AAATCAACTA CATGGATGTC TCGCCCAAGC AAATTGTGTC AGTTGCAGCT
TCATTGATTC CGTTTTTAGA GCACGATGAT GCAAACAGAG CATTAATGGG TTCAAACATG
CAACGACAGG CTGTGCCAAC CTTGCGTTCA GAAAAGCCCT TGGTTGGGAC CGGTATGGAA
AGAATCGTTG CATCTGATTC AGGAGTTTCA GTTGTTGCGA AGAGAGGTGG AGTTATTGAT
CTGGTTGATG CTTCTCGTAT TGTTGTTCGA GTGAATGACG ACGAAACAAC AGCAGGGGAA
ACAGGGGTAG ATATTTATAA CTTAACCAAG TATTTCCGTT CTAACCAGGA TACTTGTATC
AATCAAAGAC CCATAGTATC AACAGGTGAT CGAATTCAAC GAGGTGATGT CCTGGCTGAT
GGTCCATGTA CAGATATGGG TGAATTGGCT CTTGGACAGA ATCTACTGGT AGCGTTTATG
CCTTGGAATG GTTATAACTT TGAGGATTCC ATTCTTATAT CTGAACGAAT CGTTCATGAC
GACAGATTCA CTACTATCCA CATCGAAGAG CTAACATGTA TAGCTCGAGA TACCAAATTA
GGTACGGAAG AAATTACAGC AGATATTCCC AATGTAGGCG AGTCTGCACT CTCTAATTTA
GATGAATCTG GAGTTGTTTA CATAGGTGCA GAAGTTAAAG CAGGTGATAT TCTTGTGGGG
AAAGTAACTC CTAAAGGAGA AACCCAACTA ACTCCAGAAG AAAAACTGTT AAGAGCCATC
TTTGGTGAAA AAGCTTCAGA TGTTAAAGAT TCATCTTTGA GAGTTCCATC AGGTATGAAT
GGAACAGTGA TCGATGTACA AGTCTTTACC CGTGATGGAC TTGAAAAGGA TGCTCGTGCT
AAAAGCATTG AAGAAGAGCA TCTGGCTCGA GTTCGCAAGG ATTTAATAGA CGAACGGCGT
ATTCGTGAAG AAGACATCTA TCATAGAGTT TCTCATTTGC TGTTGGATAA GGTTGCAACA
GGCGGTCCTG GAAGCCTAAA GCCTGGATCT AAAATCACCC AGGATTACCT GGATAAAGTT
GAAAGAGAAA AGTGGTTTGA TATTCGTATA GAAGATGACG CAATTAGTCA GCAACTTGAA
CAACTATCCA AGCAACTGGA ACTTTTAACA AAAGAAATGG AAAAGCGCTT TAACGACAGT
AGAAAGAAAA TTATCCAGGG AGACGATTTA GCTCCTGGTG TATTAAAAAT TGTTAAAGTG
TATTTGGCTG TTAAAAGAAG AATTCAGCCT GGAGACAAAA TGGCAGGTCG TCATGGAAAC
AAGGGTGTGA TCTCCATTGT TGTTCCAGTT GAAGATATGC CGCATATGGA AGATGGAACG
GCTGTAGATA TCGTTCTTAA TCCATTGGGC GTACCATCGC GAATGAATAT CGGCCAGGTT
CTTGAAACGC ATCTGGGACT AGCTGCCAAA GGATTGGGAA GAAAGATTGC ACAGATGCTT
GATGAAAAGC AAACACCTGA AGCAATAAAA GCATACCTTG AGAAAATTTA TAATCATGAC
GGAGTGCAGC GTGTTAATTT GAAATGCCTC AATGATGATG AATTGATGAC ACTGGCGGAT
AACCTGAGAG CTGGTGTGCC GATGGCAACT CCTGTCTTTG ATGGTGCTAC TGAGCAAGAA
ATCAAAAGTA TGCTGCAGTT AGCAGATTTG CCAGCAGATG GTAAAACCGT GTTGATAGAT
GGTCGAACAG GTAATAAATT TGATAATCCG GTTACTGTAG GCTACATGTA TATGTTGAAG
TTAAACCATT TGGTTGATGA TAAGATGCAT GCTCGTTCAA CTGGATCATA CAGTTTGGTC
ACTCAACAAC CACTTGGCGG TAAAGCACAG TTTGGTGGTC AGCGTTTTGG TGAGATGGAA
GTATGGGCAT TAGAAGCATA TGGTGCAGCA TACACTTTAC AAGAAATGTT AACCGTAAAA
TCAGATGACG TCGGAGGTCG AACAAAGATC TATAAAAATA TAGTCGATGG AGATCATCGT
ATGGACCCAG GAATGCCTGA ATCCTTCAAT GTATTATTGA AGGAAATTAG AGCACTGGGA
ATTGATATCG AGTTGGAGCA TGACTAA
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| Protein sequence | MAVAEAKPQY SHAEKKRFRK SFGKQTDIMP IPNLLEIQLK SYRDFLQTDT KLSEQLNTGL
HAAFSSVFPI ESFSGNARLE YVGYKLGEPA FDVRECKLRG LTYSAPLRVK IRLVVLDKDA
SDDPKPIKDI REQDVFMGEI PLMTDVGTFV VNGTERVVVS QLHRSPGVIF EHDKGKTHSS
GKLLYSARII PYRGSWLDFE FDPKDCVYVR IDRRRKLPVT ILLRALGYEA EDILNEFFET
TCCHLKNGEY HIDLIPQRLR GEIASFDIHV PETGELIVEQ GRRITARHIK QMEKSQMQDL
VVPRDYLIGK TLAKNIIDTS TGEFLAQAND EITEELLDAM ASHGILQIDM IYTNDLDHGS
YISDTLKIDP TGSQLEALVE IYRMMRPGEP PTKEAAEALF KNLFFVEERY DLSAVGRMKF
NRRVGIKSDE GPGTLTKEDI LSVIKTLIDI RNGIGMVDDI DHLGNRRVRS VGEMTENQFR
VGLVRVERAV KERLSLVESE NLMPQDLINA KPVSAAIKEF FGSSQLSQFM DQVNPLSGVT
HKRRVSALGP GGLTRERAGF EVRDVHTTHY GRVCPIETPE GPNIGLINSL SVYARTNEYG
FIETPCRKVV NGRVTDEVEY LSAIEEVDQY IAQSNVELDA QGNILADLVP CRHQNEFSLT
TPDKINYMDV SPKQIVSVAA SLIPFLEHDD ANRALMGSNM QRQAVPTLRS EKPLVGTGME
RIVASDSGVS VVAKRGGVID LVDASRIVVR VNDDETTAGE TGVDIYNLTK YFRSNQDTCI
NQRPIVSTGD RIQRGDVLAD GPCTDMGELA LGQNLLVAFM PWNGYNFEDS ILISERIVHD
DRFTTIHIEE LTCIARDTKL GTEEITADIP NVGESALSNL DESGVVYIGA EVKAGDILVG
KVTPKGETQL TPEEKLLRAI FGEKASDVKD SSLRVPSGMN GTVIDVQVFT RDGLEKDARA
KSIEEEHLAR VRKDLIDERR IREEDIYHRV SHLLLDKVAT GGPGSLKPGS KITQDYLDKV
EREKWFDIRI EDDAISQQLE QLSKQLELLT KEMEKRFNDS RKKIIQGDDL APGVLKIVKV
YLAVKRRIQP GDKMAGRHGN KGVISIVVPV EDMPHMEDGT AVDIVLNPLG VPSRMNIGQV
LETHLGLAAK GLGRKIAQML DEKQTPEAIK AYLEKIYNHD GVQRVNLKCL NDDELMTLAD
NLRAGVPMAT PVFDGATEQE IKSMLQLADL PADGKTVLID GRTGNKFDNP VTVGYMYMLK
LNHLVDDKMH ARSTGSYSLV TQQPLGGKAQ FGGQRFGEME VWALEAYGAA YTLQEMLTVK
SDDVGGRTKI YKNIVDGDHR MDPGMPESFN VLLKEIRALG IDIELEHD
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