Gene lpl0162 details

Gene Information

• Locus tag: lpl0162
• Symbol: lvhD4
• ID: 3114021
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Legionella pneumophila str. Lens
• Kingdom: Bacteria
• Replicon accession: NC_006369
• Strand: +
• Start bp: 192178
• End bp: 194079
• Gene Length: 1902 bp
• Protein Length: 633 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 637581939
• Product: hypothetical protein
• Protein accession: YP_125538
• Protein GI: 54293123
• COG category: [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG3505] Type IV secretory pathway, VirD4 components

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGTAATC CACGGGTTAT TGCAGTCGCC TTAATCATCG GGCTTGCCAT AACCGCCCAA 
ATTGCAGTGC TGTTGACAGG TATCACCCAG TGGTCAAGTC CATTGGTGCT TATTGATTTA 
ATCAGACATG GATTCTATTG GGAAACCACA ATCGCAGGTT GTATCACCGC TGTTGTGATG 
GGTTGCATGG CTGGCTTTTT GAAACAGGGA TTTTATCGAT ACGTTTCCCT TTTAATCTTA 
AGCACCTTGG TGGGTGTAAT GGCCATTATG CTATTGGGAT TTGAACTCTA TAGCTGGGTT 
TTTTTAAATG CGTTCCAAAG TCCTTTCAAA GTAGTGGAGC TGGCTACCCT TCGATATCAA 
GAACCTGAAC TATGGCGAAA CTTTCTGACT ACTGAAGGGG TTGCATTCTT CCTGATGTTT 
TTAGCGCTTG TGATTTACCT GTTTCATTGG CTCAGGCCAG ATAACAAGGC ACTGGGTAAT 
GCCCATTTCT CAAATGGCTT TGAAACCAAA CGCGCAGGAT TTTTTGAGCG TCAGGAACAA 
AGCATACTGA TTGGTAAAAA ATACGGTGCG CCTTTGTATT CAAACGGCTT TGAACATGTT 
CTGGTTTTTG CACCCACCGG AAGCGGTAAA ACACGAAGCA TCGGCATACC CAATCTGTTT 
CACTACCCCT ACTCAGTAGT GTGCAATGAT GTAAAACTCA CGCTTTTTAA AACAACCTCA 
GGATACCGTG AGCGTATGTT AGGGCATCGA TGCTTTTGCT GGGCACCTGC TGATGAGAAC 
CGAATCACGC ATTGTTACAA TCCCTTATCC CTAATCTCTG AGGATAAGAT TCAACGCCTA 
ACGGACATTC AGCGCATAGC CCATATTCTA ATGCCAGATA ATAAAAAGTC CGACCCCATT 
TGGCAGCAAG CCTCACGTAA ATTATTTAAA GTGGCCGTGC TGTACCTGCT GGATACGCCT 
GAAAGACCCA CCACCCTTGG CGAAATAAAC CGCTTGGTCA AACAGGCCGG ATTTGATGAT 
TGGCTGGCCT CAGTCTTGGA GGAAACCGAT CATCTCGACC CGGAGTTTTA CCGCAATGGC 
TATTCCTATT TGAATAATCA TGAAAAGACG AGAAGCTCGA TTCTTGAAAC GTTTTCCGGC 
TACTTTGAAT TATTCGATGA TCCCACTATT GATGCCGCCA CAGCGCATTC TGATTTTGAT 
TTACGTCAGT TAAGACGAGA AAAAATAACG ATTTACATCG GTTTTACCGA TGATGACATG 
GAACGACTCT CACCGTTGTT AACACTGTTC TGGCAGCAGC TTATTTCTGT CATGATTAAA 
AACATCCCCG ACCCAGTGGA TGAACCCTAT CCTCTGTTAT GCCTGATTGA TGAGTTTTCA 
TCATTAGGCC GTATTGAAAG GCTAAGGCGT TCACTTAAAT TATTGCGCGA ATACCGTGTG 
CGTTGTGTAC TCATCATGCA ATACATAGCC CAAACCTATG AACAATACAC CCATGATGAA 
GCCAAAGCCT TTACCAACAT TAAAACTAAA ATAGCTTTTG CTACCGAAGA CATCTTTGAT 
GCGGAGTATG TCAGTAAATT GTTAGGTACA CGCACCGTGA AAGTATCCGC AGGCTCCACC 
AGTACCCAAA CCCAAGGTTA TTCCGAGTCT AAAAGCTATA ACTATCAGGC CATCCCTTTA 
TTAAGACCGG ATGAAGTCAT GCGTTTACCC GAAGATCAAA CCCTGATTAT GCGAACAGGT 
CATGCACCCG TTAAGGCTTC GCAAATGATT TGGTATCTGG ATCCTGAGAT GAAGCATTTG 
GCCTGCGGTC ATACCGAAGT ACCGCGCCAA ATCGTTCAGC ATCATCCATT TATCCATCGT 
TCATCAGATA GAACGGCACT GCCCGAAGCA TTCGAACTAT AA 

 

Protein sequence

MRNPRVIAVA LIIGLAITAQ IAVLLTGITQ WSSPLVLIDL IRHGFYWETT IAGCITAVVM 
GCMAGFLKQG FYRYVSLLIL STLVGVMAIM LLGFELYSWV FLNAFQSPFK VVELATLRYQ 
EPELWRNFLT TEGVAFFLMF LALVIYLFHW LRPDNKALGN AHFSNGFETK RAGFFERQEQ 
SILIGKKYGA PLYSNGFEHV LVFAPTGSGK TRSIGIPNLF HYPYSVVCND VKLTLFKTTS 
GYRERMLGHR CFCWAPADEN RITHCYNPLS LISEDKIQRL TDIQRIAHIL MPDNKKSDPI 
WQQASRKLFK VAVLYLLDTP ERPTTLGEIN RLVKQAGFDD WLASVLEETD HLDPEFYRNG 
YSYLNNHEKT RSSILETFSG YFELFDDPTI DAATAHSDFD LRQLRREKIT IYIGFTDDDM 
ERLSPLLTLF WQQLISVMIK NIPDPVDEPY PLLCLIDEFS SLGRIERLRR SLKLLREYRV 
RCVLIMQYIA QTYEQYTHDE AKAFTNIKTK IAFATEDIFD AEYVSKLLGT RTVKVSAGST 
STQTQGYSES KSYNYQAIPL LRPDEVMRLP EDQTLIMRTG HAPVKASQMI WYLDPEMKHL 
ACGHTEVPRQ IVQHHPFIHR SSDRTALPEA FEL