| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | lpl0030 |
|---|
| Symbol | |
|---|
| ID | 3116228 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Legionella pneumophila str. Lens |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_006369 |
|---|
| Strand | + |
|---|
| Start bp | 35567 |
|---|
| End bp | 38497 |
|---|
| Gene Length | 2931 bp |
|---|
| Protein Length | 976 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 637581809 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_125409 |
|---|
| Protein GI | 54292994 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAGATA AAATGAGGAA GAGTAAAAAG CCGCATCCAT TAAATCATAT TGCTTCAGGA
GATAATTTCA ACCATTTTAA CCTGCTAGAA CGAAGCTTAA TAAGCCAATT GATTGAATTG
AGTTATGATG AAAATACCCT ACATACTTTA AGCTTAAGTG GGTTGAAATT ACTTGGCAAG
CATCCCTTAT TAAAAGACAC AATCACCGCA GTTTGGCATC ATGATGGCAG TCATATTAAT
ATTCTGGCAT CTAATGGATT AAAATTTGAT GCGCCAAAGG AATTGGAGAA ATTTTTAGCT
GTAGTCTCGG ATTGGCATTT TTTAAAAATA TATAAGACAA AGCTCAAGAA GCATTCTGAA
GAAAAATTAA AGCAGCGTAT CGATATTTGC CTTGATAAAT ATCAAGGTAA TTTATTTTGT
ATTAGTTTTT GGTTTGATTC TATTGATTGT AACTTTGAAA TACTAATGCC TTTTTTTAAA
GATATTCTGG GTTTATTAAA CCTGTCTTTA GCCAAATTGA TGAATAAAAA AAGGGAAAAG
CTGCTGACCA CTATTTTGGA AAAAGCTGGC GACTCGGTCG AAATAACGAA TGAAGAGGCT
GTCATTCAAT ATGTTAATCC CGCTTTTGAG AATATCACTT TGTATAATGC CCGTGAAGCA
ATGAATAAAA CAGTGGCGTC CTTATTGCGC TCACCGGTCG AAGACGCTCA GTTGTTTGAA
GAAATAAACC AAACCCTTAA ATCGGGGAAT ACATGGAAGG GGCAAATACG CTCAAGAAAA
AAGGATGGCA GCTATTGGGT CGCTCAAACC ATCATCGTCC CTGTGATGGA TGATGAATTG
GGGCGAATTA CCCAACATAT AGCAATTAAA CAAGACATTA CGGAACAAGT ACACCGATTC
AATCAACTAA AAATCAGTGA AGAACGATAT CGAAATCTGA TGAATGCTGT AACGGATGGT
ATTTTTATCC ATAATTTGCA GGGAGCATTT TTAGAAGTTA ATGAAGCAGC TTGTTTGTCT
TTGAATTATA GTCGGGAAGA ATTAATTAAT TCCTATGTTT GGGATATTGA AGTGGGATTT
TCTCAGGAAA GTTTAAATCA GTTGTGGGAA AATGTTCAAA AGGGCTCCAT TAATACAGAA
GGCATGCACC GCAGAAAAGA TGGCACAACT TTTCCTGTTG ACGTTCGTTT GGCAGTTTTT
AATGCGACTG GGGAGAAATT GGTTTTGGCT ATAGTACGGG ATATTACACT TCAAAAACGC
TCTGAAGCAA CTATAAGAAA ATTAACACGA GCGTTAGAGC AAAGCCCTGT TTTAGTCATA
ATAACTGATA AAACTGGAAC CATTGAGTAT GTCAATGCAA AAGTGATAGA GCAAACAGGT
TATCGCAAAG AAGAATTGGT TGGTGGAAAT ACAAGAATTT TACGATCAGG CCAAACTCCT
CATGAAATTT ATAAAACCAT GTGGGAACAC TTAGCCAATG GGGAAGAGTG GCATGGTGAG
TTGCTGAATA AAAACAAATC CGGAGAGCAT TTTTGGGTAT CAGCAATTAT ATCTCCAATT
CGTAATGAGA ATGAAGAGAT AACTCATTAT CTGGCCGTTA TGGAGGATGT AACTCAGAAG
AAAAGCTACG AGGAAATGTT AAAACACCAG GCAACATTTG ATAATTTAAC CAACCTTCCC
AATCGTCTCT ATGCAGTTAA TAAATTGGAA CGAGTTATTT CAAAATCCCA CATCAATAAT
CAAAAATTGG CGGTGCTGTT TTTAGATTTG GATGAATTTA AACAGATTAA TGATTCCTTA
GGGCATGCGA TTGGAGATTT ATTATTAAAA GCGTTATCGG AGCGCTTTCT ATCTATGATA
CGGCAAACCG ATACTATTGC CCGCTTAGGC GGTGATGAAT TTATGATGAT TTTAGAAAAC
ATCATGCAGG ATAAAGATGC TGAAATTATC GCAAAAAAGT GCCGGGAAAT TTGTTCTCAG
CCTTTTGTTA TTGAATCACA AGAGCTATTG GTGTCTACAA GTATAGGAAT TGCAATATAT
CCTGAGCATG GCAAGGATGC CAAAACGTTA ATGCGTAACG CAGATACAGC TATGTATCAG
AGCAAGATAC GGGGCAAAAA TAATTGGACG GTATTTCAAA ATACCATGAT TGAGGGGGCA
AATAACCATA TTCGTATTAA GACGGAATTA GATCAGGCGT TTACCCGTAA TGAGTTATAT
ATTTGCTACC AGCCGATCAT TGAGCTGAAG GAAAATAAGG TCGTGGCTGC GGAGGCCTTG
TTACGCTGGC AGAATACAAC CTTAGGTCAA ATTAATCCTG ATCAGATTAT TAGCTTGGCC
GAGGAGACCG GTATGATTAT TCCATTGGGA TATTGGATTT TGGATAAGGT GTGTGCGCAA
GCGAAAGAGT GGGAATTTAT TACCGGTAGC AAGATAAAAG TAGCGGTGAA TATCTCTACC
TTACAATTAA AGCAAAAGGA TTTTATTCAT AAGGTGCAAC TCATTTTGAA AAGAACAAAA
TTATCTGCAG ATTCTCTAAT TTTTGAAGTT ACAGAATCGG CATTTATTGA TGATTCAAAA
TTCATTTTAT CTCAATTAAA CAAATTAAGT GACATGGGCA TTCATTTTTC TTTGGATGAT
TTTGGGGTGG GTTATTCTTT CTTGCAGTAT ATTAAATCCT ATCCATTCAA AAATTTAAAA
ATTGATCGGG TTTTTATCCA GGGTGTAAAT ACAAATCATA ATCAGTTAAG TTTGATTAAT
AGTATTATAA CTATGGCGCG CAATCTGAAA TTATCTGTTA TTGCTGAAGG AATAGAAACG
GCAGAACAGC TGGAGTTAAT GCGCTCAATG AACTGCGATA TGGTACAAGG ATGGTATTTT
TCCAAGCCTT TGAGCGGGGA TAAATTTTTG TTTTATTTAA TGAATAAGTA A
|
|---|
| Protein sequence | MIDKMRKSKK PHPLNHIASG DNFNHFNLLE RSLISQLIEL SYDENTLHTL SLSGLKLLGK
HPLLKDTITA VWHHDGSHIN ILASNGLKFD APKELEKFLA VVSDWHFLKI YKTKLKKHSE
EKLKQRIDIC LDKYQGNLFC ISFWFDSIDC NFEILMPFFK DILGLLNLSL AKLMNKKREK
LLTTILEKAG DSVEITNEEA VIQYVNPAFE NITLYNAREA MNKTVASLLR SPVEDAQLFE
EINQTLKSGN TWKGQIRSRK KDGSYWVAQT IIVPVMDDEL GRITQHIAIK QDITEQVHRF
NQLKISEERY RNLMNAVTDG IFIHNLQGAF LEVNEAACLS LNYSREELIN SYVWDIEVGF
SQESLNQLWE NVQKGSINTE GMHRRKDGTT FPVDVRLAVF NATGEKLVLA IVRDITLQKR
SEATIRKLTR ALEQSPVLVI ITDKTGTIEY VNAKVIEQTG YRKEELVGGN TRILRSGQTP
HEIYKTMWEH LANGEEWHGE LLNKNKSGEH FWVSAIISPI RNENEEITHY LAVMEDVTQK
KSYEEMLKHQ ATFDNLTNLP NRLYAVNKLE RVISKSHINN QKLAVLFLDL DEFKQINDSL
GHAIGDLLLK ALSERFLSMI RQTDTIARLG GDEFMMILEN IMQDKDAEII AKKCREICSQ
PFVIESQELL VSTSIGIAIY PEHGKDAKTL MRNADTAMYQ SKIRGKNNWT VFQNTMIEGA
NNHIRIKTEL DQAFTRNELY ICYQPIIELK ENKVVAAEAL LRWQNTTLGQ INPDQIISLA
EETGMIIPLG YWILDKVCAQ AKEWEFITGS KIKVAVNIST LQLKQKDFIH KVQLILKRTK
LSADSLIFEV TESAFIDDSK FILSQLNKLS DMGIHFSLDD FGVGYSFLQY IKSYPFKNLK
IDRVFIQGVN TNHNQLSLIN SIITMARNLK LSVIAEGIET AEQLELMRSM NCDMVQGWYF
SKPLSGDKFL FYLMNK
|
|---|
| |