Gene lpl0006 details

Gene Information

• Locus tag: lpl0006
• Symbol: speA
• ID: 3114625
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Legionella pneumophila str. Lens
• Kingdom: Bacteria
• Replicon accession: NC_006369
• Strand: -
• Start bp: 7842
• End bp: 9734
• Gene Length: 1893 bp
• Protein Length: 630 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 637581785
• Product: arginine decarboxylase
• Protein accession: YP_125385
• Protein GI: 54292970
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1166] Arginine decarboxylase (spermidine biosynthesis)
• TIGRFAM ID: [TIGR01273] arginine decarboxylase, biosynthetic

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATAATA ATACTCTATC AGATGACAAT CTTTACAACA TAGAAAATTG GGGCGAGGGA 
TACTTCCGAA TTAACTCCAA GGGAAATATT GAAATCAGTA AAAAACCCGG GAAACCAGGT 
GTTGAACTAC AAACTATAGT TGATGCAGCT GATCGTGCTG GCTTGCATTT GCCTTTATTG 
ATCCGTTGTA GTGATATTCT TCATGATAGA GTCCATAGAA TATATCAGGC GTTCACCCAA 
GCTCGAGAAG ACACTTATTA TGCCGGTAAT TATCAGCTGG TTTATCCAAT TAAAGTAAAC 
CAGGAACAAA GTGTGGTACG GGAATTGTTA AAATCGCCTG ATAATCAGAT AGGCCTGGAG 
GCAGGCAGCA AACCTGAATT GATGGCGGTT ATAGGTATGC TGGGTGACCA TCAGAGTACT 
ATAGTTTGCA ACGGCTATAA AGACACAAGT TATATTCGTA CAGCGCTTAT TGCTCAACAA 
ATGGGTCATA AGGTTTTTAT TGTTATTGAA AAAAAATCTG AGTTAGACAT TATTTTAAAG 
GAGTCTGCAC GCCTTCAAAT CAAACCAACA TTAGGTGTGC GAATTCGGCT GGTCAGCAAG 
AGTGCTGGCA AGTGGGAAAA TACCGGCGGG GTTAAATCAA AGTTTGGATT AAATGCGAAA 
CAGGTACTTG AGCTGATTTT ACAATTAAAA GCCAATGATA TGCTGGATTG TTTGCAGCTA 
ATGCACTGCC ATTTAGGTTC ACAAATTGCC AATATCCATG ACATACGCCA TTGCATGCAG 
GAAGTGGCGA GATACTATAT TGAGCTACGT CAACTCAATG CTCCGATAGG TACCATCGAT 
GTGGGTGGAG GTTTGAGTGT CGATTATGAG GGGACTCGAT CCAATAAAGG ATGCTCAATG 
AACTACAGTC TTGTTGAGTA TGCTACGCAC ATCATGTTGG CTTTAAAACA CTTATGTCAA 
GAAGCTGAGA TATCAGAGCC TGATCTTATC TCCGAATCAG GACGAGCATT AACAGCCCAT 
CATGCTGTAT TAATTTCTAA TATTACGGAT GTAGAGATCA TCAATAAAGC GCCCGTTCTT 
CCTGAAATAT CGGAAGATGA TTCGCATGTC ATTCGAGATA TTTACGATAC TTATCAAGCC 
ATTACAGATA GCTCGCCCAC TGAAATATAT AATTACGCAG CTCATTCGCT TAATGAAGCG 
CATTCCCTTT TCAAGCATGG GGTAATTAGC CTGCAGGAAA AGGCTAAGGT AGAAGCTTTT 
TATACTAATA TTTGTATGGA AATAAAAGAT AAACTGGATG AAGAAAATCC AAGTGAAAAG 
GCTTTGCTAA TGAGAATCAA TGAGTGCATG GCTGCCAAGA TATTTTGTAA TATCTCTTTT 
TTCCAATCTA TTCCTGATGC TTGGGCTATT GGTCAGATTT TCCCGGTAGC CCCTATATCT 
CAACTTAATA GAACACTTAG TATGCATAGT GTCCTGCAGG ATTTAACCTG CGATTCAGAT 
GGTACAATTA AGCAATACCC TGGAAGTTCC TGCGTTACAA CCACATTGAT GCTCCCTTCA 
TACGATATCA ATAACCCTTA TAACATCGGA TTTTTCCTGG TTGGTGCCTA TCAGGAAATA 
TTGGGTAATC TGCATAACCT GTTTGGAGAT ACCAATTCTC TAGATGTAAA GCTTTCTGAT 
GATGGACAAT TTGAGCTGGA TGATTTAGTC AGCGGCGACA CCGTAACAAA CGTGTTGAAT 
TTGGCCCATT TTGATACCAA AAAGTTAATT CAATCTTATG AAAAGCAATT AATTAAATCT 
GAACTTCCTA AGGAAAAGGC ACTCTCTTAC TTAAACGAAT TAAGAAGTAT TTTTTCTCAA 
TTAACTTACC TTGATGGAAA TATAGCACAG TGA 

 

Protein sequence

MNNNTLSDDN LYNIENWGEG YFRINSKGNI EISKKPGKPG VELQTIVDAA DRAGLHLPLL 
IRCSDILHDR VHRIYQAFTQ AREDTYYAGN YQLVYPIKVN QEQSVVRELL KSPDNQIGLE 
AGSKPELMAV IGMLGDHQST IVCNGYKDTS YIRTALIAQQ MGHKVFIVIE KKSELDIILK 
ESARLQIKPT LGVRIRLVSK SAGKWENTGG VKSKFGLNAK QVLELILQLK ANDMLDCLQL 
MHCHLGSQIA NIHDIRHCMQ EVARYYIELR QLNAPIGTID VGGGLSVDYE GTRSNKGCSM 
NYSLVEYATH IMLALKHLCQ EAEISEPDLI SESGRALTAH HAVLISNITD VEIINKAPVL 
PEISEDDSHV IRDIYDTYQA ITDSSPTEIY NYAAHSLNEA HSLFKHGVIS LQEKAKVEAF 
YTNICMEIKD KLDEENPSEK ALLMRINECM AAKIFCNISF FQSIPDAWAI GQIFPVAPIS 
QLNRTLSMHS VLQDLTCDSD GTIKQYPGSS CVTTTLMLPS YDINNPYNIG FFLVGAYQEI 
LGNLHNLFGD TNSLDVKLSD DGQFELDDLV SGDTVTNVLN LAHFDTKKLI QSYEKQLIKS 
ELPKEKALSY LNELRSIFSQ LTYLDGNIAQ