Gene lpp3073 details

Gene Information

• Locus tag: lpp3073
• Symbol: trmE
• ID: 3116725
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Legionella pneumophila str. Paris
• Kingdom: Bacteria
• Replicon accession: NC_006368
• Strand: -
• Start bp: 3499350
• End bp: 3500690
• Gene Length: 1341 bp
• Protein Length: 446 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 637581775
• Product: tRNA modification GTPase TrmE
• Protein accession: YP_125375
• Protein GI: 54299006
• COG category: [R] General function prediction only
• COG ID: [COG0486] Predicted GTPase
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR00450] tRNA modification GTPase TrmE

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAATAG ATACCATTGT TGCTATCGCT ACCCCGCCAG GACGAGGCGG GGTAGGAATC 
GTCAGAATAT CAGGTCCAAA AGCTTATGCT ATAGCCCTTT GTCTAAATGG GAACAAAGCA 
TTGCAACCAC GCTTAGCCAC TTTTTGCTCT TTATATAAAG GAAATAATGA AGTCCTTGAT 
CAAGGTTTGG TTCTTTATTT TAAAGGACCA CATTCTTTTA CAGGCGAGGA TATTATTGAA 
ATTCAAGCGC ATGGCTCACC AGTAGTTTTG GATTTATTAA TTAAGGAATC AATAGCAGCA 
GGGGCAAGGC TAGCCAGGCC GGGTGAGTTT TCTGAAAGAG CATTTCTTAA TGATAAAATT 
GATTTAATTC AAGCAGAAGC CATAGCTGAT TTAATTCAAG CCAGTTCAGA TACTGCGGCT 
CGTATGGCTT TAAAATCACT GCAAGGTGAT TTTTCTAAAA AAATAAATCA ATTGAATGAA 
GAGCTAATTT ACTTACGCAT GTATGTTGAA GCCGCTATCG ATTTTCCTGA AGAGGAAATT 
GATTTTCTTA ATGATGGAAA TGTCAGTCAA TTACTACAAA GAATTATTGG GCGATTAGAA 
GAGATACGTT CACAAGCGAA TCAAGGAGTT TTGTTGCGTG AAGGATTATC CTTGGTTATT 
GCTGGCAGGC CTAATGCAGG AAAATCAACC TTAATTAACA ACCTGGCAGG GCGAGATGTT 
GCCATTGTTA CTGAAATTGC TGGTACTACG CGAGATATTA TGCGAGAACA TATCCTATTG 
GATGATATCC CTCTACACAT TATCGATACG GCAGGATTAA GAGACAGCGA TGATCTGGTG 
GAGAAAGAGG GAATAAAACG TGCTTGGCAA GAGTTGAAGC GAGCTGATTG TGTGCTTCTT 
GTAGTAGATA TTAACAATCG TGATCAACAA AATTCTCTGC TTAATGAATT GAGATTAACA 
TTACCCAATA AAATACCCAT AATCACGGTA TACAATAAAA TTGATACTAC TAAACTTACA 
GCAAAATGTG ATGAGCATAC GGTTTATTTG TCTGCAAAAA CTGGTGAAGG ACTGGATGAG 
CTAAAAAAAG TGATCAAACA AGTGGTTGGA TATCAACCAA CAGAAGGCCA ATTTTTAGCT 
CGCAGACGAC ATCTACAAGC GTTGGACGAA GCAAAAGCTT TGTTACTAAC CGGGCAATCG 
CAGCTAACAA ATCATAAAGC TGGAGAATTG TTGGCAGAAG ATTTACGGTT AGCTCATCAG 
ACTTTATGTG AAATTACTGG TGAGTTCACT TCAGACGATT TATTAGGAAA AATTTTTTCC 
AGTTTTTGTA TTGGAAAATA A 

 

Protein sequence

MSIDTIVAIA TPPGRGGVGI VRISGPKAYA IALCLNGNKA LQPRLATFCS LYKGNNEVLD 
QGLVLYFKGP HSFTGEDIIE IQAHGSPVVL DLLIKESIAA GARLARPGEF SERAFLNDKI 
DLIQAEAIAD LIQASSDTAA RMALKSLQGD FSKKINQLNE ELIYLRMYVE AAIDFPEEEI 
DFLNDGNVSQ LLQRIIGRLE EIRSQANQGV LLREGLSLVI AGRPNAGKST LINNLAGRDV 
AIVTEIAGTT RDIMREHILL DDIPLHIIDT AGLRDSDDLV EKEGIKRAWQ ELKRADCVLL 
VVDINNRDQQ NSLLNELRLT LPNKIPIITV YNKIDTTKLT AKCDEHTVYL SAKTGEGLDE 
LKKVIKQVVG YQPTEGQFLA RRRHLQALDE AKALLLTGQS QLTNHKAGEL LAEDLRLAHQ 
TLCEITGEFT SDDLLGKIFS SFCIGK