Gene lpp2721 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus taglpp2721 
SymbolrpoH 
ID3117176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLegionella pneumophila str. Paris 
KingdomBacteria 
Replicon accessionNC_006368 
Strand- 
Start bp3101317 
End bp3102184 
Gene Length868 bp 
Protein Length284 aa 
Translation table11 
GC content41% 
IMG OID637581418 
ProductRNA polymerase factor sigma-32 
Protein accessionYP_125026 
Protein GI54298657 
COG category[K] Transcription 
COG ID[COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) 
TIGRFAM ID[TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CGGAGGAAGT AGTATGAGTC AACAGTTGCA ACTTGCTGCA ATGAATCTAC CTGTTGGTAG 
TCTTGATTCT TATATCCATC GAGTAAATCA AATTCCAATG CTGACTTTGG AAGAGGAAAT 
TGCATACGCC GAGCGTTTTC ATTCTGAAGG AGATATAGAA GCCGCTCGAC AATTAGTTCT 
TGCGCATTTG CGCTATGTAG TTCGTGTAGC CCGCGGTTAT CTTGGGTATG GATTGCCTTT 
AAGTGATTTA ATTCAGGAAG GTAATGTAGG CTTGATGAAA GCCGTAAAAC GGTTTGACCC 
CAAGATGGGC GTACGCCTTG TTTCTTTTGC TGTTCATTGG ATTAAAGCAG AAATTCATGA 
GTTTGTGCTG CGTAACTGGC GAATAGTTAA AGTTGCTACA ACCAAGGCCC AACGTAAATT 
ATTTTTTAAT TTGCGCCAAA TGAAAAATCG ATTGGGTTGG TTCAGCAATG AAGAAGTTGA 
CGCTGTCGCC AAAGATTTGG GCGTTAGCCG AGAAGACGTG TTGTTGATGG AGCAACGTTT 
AAATGTTATG GATTCATCTT ATGATGCGCC AGATGTTGAT GATAATGATG ATGCTTACAA 
AGCGCCTGAG CGTTATTTGT TTAATGTGAA CGATGATCCT GCTGTTTTGT TAGAGAATGA 
GGATACAGGC GATCAGGGGC GTGAAAAATT ACTGTTTGCT ATGGAACAAC TGGATGAACG 
TAGCCAGGAT ATTTTACAAC AACGCTGGCT TGCTGAAGAA AAACTCACGT TACATGATTT 
GGCAGAAAAA TATGGTGTCT CTGCTGAACG GGTTAGGCAA CTTGAAAAAA ATGCCATGAA 
AAAAATCCGT CAATACATGG AAGGTTAA
 
Protein sequence
MSQQLQLAAM NLPVGSLDSY IHRVNQIPML TLEEEIAYAE RFHSEGDIEA ARQLVLAHLR 
YVVRVARGYL GYGLPLSDLI QEGNVGLMKA VKRFDPKMGV RLVSFAVHWI KAEIHEFVLR 
NWRIVKVATT KAQRKLFFNL RQMKNRLGWF SNEEVDAVAK DLGVSREDVL LMEQRLNVMD 
SSYDAPDVDD NDDAYKAPER YLFNVNDDPA VLLENEDTGD QGREKLLFAM EQLDERSQDI 
LQQRWLAEEK LTLHDLAEKY GVSAERVRQL EKNAMKKIRQ YMEG