Gene lpp2648 details

Gene Information

• Locus tag: lpp2648
• Symbol: def
• ID: 3118187
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Legionella pneumophila str. Paris
• Kingdom: Bacteria
• Replicon accession: NC_006368
• Strand: -
• Start bp: 3015451
• End bp: 3015963
• Gene Length: 513 bp
• Protein Length: 170 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 637581345
• Product: hypothetical protein
• Protein accession: YP_124953
• Protein GI: 54298584
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0242] N-formylmethionyl-tRNA deformylase
• TIGRFAM ID: [TIGR00079] peptide deformylase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAATTC GCAAGATTCT TTATTTACCT GATGAGCGGT TAAGAAAAAT AGCTAAGCCG 
GTCGAGACTT TTGATGAGAG TTTACAGACA TTAATCAACG ATATGTTTGA TACAATGTAT 
GATGCTCGGG GAGTTGGGCT TGCCGCACCA CAAATAGGAG TCAGCTTGCG TTTATCTGTC 
ATTGATATAG TGGGAGATAA AAAGGAGCAG ATCGTTATTG TTAATCCTGA AATAGTTTCC 
TCTCATGGCG AAAAAGAATT TGAAGAAGGC TGTTTGTCTG TCCCAGGGGC TTATGATACC 
GTTGTCAGAG CTGAAAAAGT GACCGTGAAG GCACTGGATA GGTTCGGCAA ACCGTTTGAA 
ATTACGGGTG AAGGGCTGCT TGCCGAGTGT TTACAACATG AAATTGACCA TATGAATGGC 
AAATTGTTTG TCGATATGTT GTCCCCATTG AAGAGAATGA TGGCTCGCCG GAAATTAGAT 
AAGTTCAAGC GTTTACAAGC TCGTAAACCA TGA 

 

Protein sequence

MAIRKILYLP DERLRKIAKP VETFDESLQT LINDMFDTMY DARGVGLAAP QIGVSLRLSV 
IDIVGDKKEQ IVIVNPEIVS SHGEKEFEEG CLSVPGAYDT VVRAEKVTVK ALDRFGKPFE 
ITGEGLLAEC LQHEIDHMNG KLFVDMLSPL KRMMARRKLD KFKRLQARKP