| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | lpp2646 |
|---|
| Symbol | |
|---|
| ID | 3118532 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Legionella pneumophila str. Paris |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_006368 |
|---|
| Strand | - |
|---|
| Start bp | 3013230 |
|---|
| End bp | 3014513 |
|---|
| Gene Length | 1284 bp |
|---|
| Protein Length | 427 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637581343 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_124951 |
|---|
| Protein GI | 54298582 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
|---|
| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTAA ATGACAGATT CAACGCCTTA AAAATTTTGA CGGCTTTGAT GGAAAGCAGA
AAAAACCTGT CCTATTTGAT GTCTCCGCAA GAGATTTCTC CCATGACAAA AGAAATTTGC
TATGGGTTTT GTCGTCATTA TTTTCGTTTA CAATCCATAG CTGATACTTT AATCAATAAG
CGACCTAAAG ATAATGAGGT ATGGATAGTC TTGTTGATAG GTATTTATCA ATTGCAGTAT
ATGAATAAGC CGGATTATGC CGTGGTGAAG GAGACAGTGT CTTTACTGGG GCAGGTTAAA
AAAAGTTGGG CAAAAGGACT GGTAAATGCC GTGCTAAGGA ATTTTTGCCG TCGACAAGAC
CATATTCTGG AAAAGTTGGC AGCAGAACCG GTTTTTATCT ATGGACAGCC GAATTGGTTA
CTTCAACGCC TGCAAAAAGA CTGGCCAAAC GATTGGCAAT TCATCGCTGA AGCGAATGAT
AGACACCCAC CCATGACTTT GAGAGTCAAT GTGTTGAAAC ACTCAGTTGA TGAGTATCTT
GATTTACTAA AAAAATCCGG GATAGAGGCT TTTAAACACC CTGTCGCACC TGATGGAATT
ACTTTGGCAA TCCCTTGTGA TGTGATGACG CTTCCTGGTT TTGCGCAAGG TTCTGTGTCT
GTTCAGGATG CTGCGCCTCA ATTAGCAGCG TATTTATTGT CTTTAAAACC TGGGCAGCGA
GTACTGGATG CTTGCTGCGC TCCTGGCGGA AAAACATGTC ATATTTTGGA GAAAGAGTCT
GGTTTGGCTT CCTGTGTTGC ATTGGATTTA GACCCACAGC GCTTACAGCG GGTCAGAGAT
AACTTAAATC GATTGGATTT GCAAGCAACG GTGGTGGAAG GTGATGTATT GGAACCCAGA
AGCTGGTGGG ATGGTCATCC ATTTGATCGT ATTTTACTGG ATGCGCCCTG TTCCGCTACA
GGAGTGATTA GACGCCACTC TGATATCAAA TTATTACGAA CGGATGAAGA GATTTCAGCA
ATTTCTCAGG TACAATCCAG CATGTTGAAT TCATTATGGC CACTGCTTGC ACCAGGTGGT
TTAATGGTTT ATGCCACATG CTCTATTATG AGTGATGAAA ATGAGTTGCA AATCTCCCGA
TTTGTTGCAG AGCATCCGGA TTGTCAAGTG AGTGATGGCA AATGGTCCTG GGGAAGGTGG
ACTGGGCATG GTCAGCAGAT ATTGCCTGGG GAGCACGGCA TGGATGGCTT TTTTTACAGT
GTATTGCGAA AGGATGAAAA ATGA
|
|---|
| Protein sequence | MKVNDRFNAL KILTALMESR KNLSYLMSPQ EISPMTKEIC YGFCRHYFRL QSIADTLINK
RPKDNEVWIV LLIGIYQLQY MNKPDYAVVK ETVSLLGQVK KSWAKGLVNA VLRNFCRRQD
HILEKLAAEP VFIYGQPNWL LQRLQKDWPN DWQFIAEAND RHPPMTLRVN VLKHSVDEYL
DLLKKSGIEA FKHPVAPDGI TLAIPCDVMT LPGFAQGSVS VQDAAPQLAA YLLSLKPGQR
VLDACCAPGG KTCHILEKES GLASCVALDL DPQRLQRVRD NLNRLDLQAT VVEGDVLEPR
SWWDGHPFDR ILLDAPCSAT GVIRRHSDIK LLRTDEEISA ISQVQSSMLN SLWPLLAPGG
LMVYATCSIM SDENELQISR FVAEHPDCQV SDGKWSWGRW TGHGQQILPG EHGMDGFFYS
VLRKDEK
|
|---|
| |