Gene lpp2642 details

Gene Information

• Locus tag: lpp2642
• ID: 3118202
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Legionella pneumophila str. Paris
• Kingdom: Bacteria
• Replicon accession: NC_006368
• Strand: -
• Start bp: 3009015
• End bp: 3010822
• Gene Length: 1808 bp
• Protein Length: 597 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 637581339
• Product: hypothetical protein
• Protein accession: YP_124947
• Protein GI: 54298578
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG2027] D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4)
• TIGRFAM ID: [TIGR00666] D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

AGGAAAATAT TTAAATGAAA AGGACGTTGA CTGGGGCATT CATGTGGGCA GTATGGTCAT 
TGTCATCTCA TGCGGCTAGT ATGCAGTTCG AGGTGGATAA ATTAATTAAT CGGCTAAACC 
CTCGTGTGAA CCTGGGGATA GTAGTGACCG ATCTAACCTC GGGCGAGACG CTATATAAAC 
GCAATGCCAA TCGTTTGTAT ATTCCTGCCA GCAACATGAA GCTTTTTTCC GAGGCAGCGG 
CTCTGATGGC CTTGGGTCCA GACTACCAGT TCAAGAATCA ACTCAGTACG AGCGCCAATC 
AATTACAACA AGGTGTTTTG CACGGAAACT TGTATTTACA TCTCAGCGGC GATCCTTCGT 
TTAGCAGAGA AGATTTAAAG GCGTTGCTTT CTTCACTCAA GGATTGGAAT ATCACAACCA 
TTCAAGGTAA TGTGATCATT GACAGTAGTC TGATGTCCAT TCCCGCCTAT CCCCCAGGCT 
GGCTAACTTC TGATTTATCT TATAGTTATG GTGCGCCAAT AGCACCTTTG ATGGTTGATT 
CCAACCGATT AACAATCACG GTCAACCCCG GGGCTAAAGC AGGCGCTCCT GCTATTGTTG 
AAGTAGATGA TGGCGGCGGT ACTATTAACC TGAATAATCA AGCGACCACG AAGGCGAGTG 
AGAAAGGATG TGGTGTAGGG TTTTATTTGG ATCCTGAGAA CAATTTAACG GTAAGAGGCT 
GTGTTGGATT AGGGCAATGG GCTGTTCAGC AACGCATCGC TATAAAGAAT CCTTTTGTTT 
ATGCCCAGGG GATGATTGTG AGTGAGCTTG CCAAGTCTAA TATTAAATTA AATGGACAGG 
TTTTGCTTGG AAGAGCGCCT GCTGGTACTT TATTAATTGC CACTCGCTAT TCAAAGCCAA 
TTTCCCAACT GATGGCAGAT ACTTTAAAAC CTTCTGATAA TTTATATGCT GATAGTTTGT 
ACTTGCATGC TGCTGCCAAA ATTAAGGGTA GTCCTGTAGA TTGGAAGCAA GCACAGCCAG 
TAATTAAAAA TTTTTTGCAG CAACAAACAG GAATCGATTT AAAAGACTCG AATTTTACAG 
ATGGTTCTGG ATTATCACGT TATAATTTGG TAACTCCAGC GCAAACCATG GCGCTTTTAA 
AATTCTTGTA TCAACGTTTC CCATTATCTT ATGAATACAT TGCTGCTTTA CCCATCTCTG 
GTCGGGATGG TACTTTGCAA AAACGGTTTA AAACCCCAAA TCAACAAGGA TTTGTGCGGG 
CCAAAACCGG GACGATGACG GGTATGAACA GTTTATCCGG TTACTTGTAT ACTGCTAATG 
GCCATACTTT GGCTTTTGCT ATGTATATCA ATAGATTACC CGGAAAACCG GCTGGGCCAG 
GACGTCCATT ATTAGACGCA TTATGCACTT ATTTCTTGCA GCAAAGCCCA ACAAGCAGTC 
GACTGGCACG GGTATTATCT CCCCACAGTC GCATTAAGTT CCAATTTAAT CCTACACAAA 
TTGAGTTACA GAGAGTTCAT CAAGCCAAAT GGAGGCGTTT GGAAACGGCA GTGAGGCAGG 
TCTTGAGAGG ACAGGATGTG AATGTGGTTT ACCGGGGCAA TGAATTAATC GTCACAGACA 
ATCAGTCTAA TGCGAATAGC GTTTGGAAAG CTTTACAATC AATTGGCAAG AAATATTCAT 
TCGCCGTAGC CTTGTCTTCT AAAGTGATGC CTGTTACACC ATCGGGAAAA CCTTTGCTTC 
TTTGGGTGCA AGCACCTTTA TCTGAAAATA AGGCAGAGAG AACCTGGATA ATTCGGGAAG 
CGGTATAA 

 

Protein sequence

MKRTLTGAFM WAVWSLSSHA ASMQFEVDKL INRLNPRVNL GIVVTDLTSG ETLYKRNANR 
LYIPASNMKL FSEAAALMAL GPDYQFKNQL STSANQLQQG VLHGNLYLHL SGDPSFSRED 
LKALLSSLKD WNITTIQGNV IIDSSLMSIP AYPPGWLTSD LSYSYGAPIA PLMVDSNRLT 
ITVNPGAKAG APAIVEVDDG GGTINLNNQA TTKASEKGCG VGFYLDPENN LTVRGCVGLG 
QWAVQQRIAI KNPFVYAQGM IVSELAKSNI KLNGQVLLGR APAGTLLIAT RYSKPISQLM 
ADTLKPSDNL YADSLYLHAA AKIKGSPVDW KQAQPVIKNF LQQQTGIDLK DSNFTDGSGL 
SRYNLVTPAQ TMALLKFLYQ RFPLSYEYIA ALPISGRDGT LQKRFKTPNQ QGFVRAKTGT 
MTGMNSLSGY LYTANGHTLA FAMYINRLPG KPAGPGRPLL DALCTYFLQQ SPTSSRLARV 
LSPHSRIKFQ FNPTQIELQR VHQAKWRRLE TAVRQVLRGQ DVNVVYRGNE LIVTDNQSNA 
NSVWKALQSI GKKYSFAVAL SSKVMPVTPS GKPLLLWVQA PLSENKAERT WIIREAV