| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | lpp2580 |
|---|
| Symbol | lmxF |
|---|
| ID | 3117615 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Legionella pneumophila str. Paris |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_006368 |
|---|
| Strand | - |
|---|
| Start bp | 2939975 |
|---|
| End bp | 2943127 |
|---|
| Gene Length | 3153 bp |
|---|
| Protein Length | 1050 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637581276 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_124885 |
|---|
| Protein GI | 54298516 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0841] Cation/multidrug efflux pump |
|---|
| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTTCCA AATTTTTTAT TGAAAGACCC GTTCTGGCCA ATGTCATTGC CTTGTTTATT
GTATTTATAG GGATAATAGC GATTGCTGTT TTGCCTGTGT CTCAATACCC TGCCATTGTT
CCTCCTACCA TCCAGGTTAC TACGACCTAT CCTGGCGCTG ATGCAAAAAC TTTGATTAAT
ACCGTCGCTT TGCCAATTGA GCAACAAGTC AATGGGGTTG AGGACATGCT GTACATGCAA
TCGACAAGTA CTAGTGGAGG CACCTATACT TTAATTGTCA CGTTTGCTAT AGGCACGGAT
CTGAACTATG CGCAAGTTCT GGTGCAAAAT CGAGTACAAG CGGCGATGGC TCAACTCCCC
GAATCAGTAC AAAAGCAAGG TGTTGTCGTT CAACAAAAGT CGACTGCTAT TCTTCAATTT
ATTACTTTGA CTTCAAAAAA TAATGAATAC GACGGCGTAT TTCTTGACAG CTATGCAACC
ATCAATATGC AAGATGAATT ATCCCGTTTA CCCGGAGTAG GGAATGTGGT GGTTTTTGGT
TCAGGAAGTT ATGCGATGCG TGTTTGGCTC GATCCTAAAA AGATGCTTGC TTTTTCTTTG
AACCCAAGTG ATGTTTTAAA TGCTATCAGC TACCAAAACA AAGAGGTGTC AGCCGGACAA
CTGGGTGCTC CTCCTACTGT TGGCAAACAA GCCTATCAAT TTACAGTGAA TGTGCCTGGA
CAACTCTCTG ATCCCAAAGA GTTTGAAAAC ATTATTATTA AAACGATTGA TACCCCACCC
GATCAAAATT CCTCTGCCAG TAGCTCTGCT CAGGTAGTAC GTATTCGTGA TGTAGGGCGA
GTTGAGTTGG GATCCGAGAG CTATAATCAG CTCGCTAATC TTAATGGTAA ACCTACAGCA
GCAATAGGTA TCTTTCAACT TCCTGGTGCC AATGCGCTGG ATGTTGCGCA AGAAGTTCGT
AAAGCCGTGG CGAAAATGGC GAAACAGTTT CCTCCGGGTC TTGAATATTC TATTCCATTT
GATACCACCG TTTTCGTCAA AGCTTCAATT GAAGAAGTAT ATAAAACGCT TTTTGAAGCA
GGAGTTTTGG TTTTAATAGT GATTATTGTA TTTTTACAAA ATTTTCGCGC TTCATTAGTA
CCCGCGACAA CGGTTCCTGT GACTATCATT GGGACATTTT TTGCCATGCT TTTATTGGGC
TATAGTATTA ATTTGCTGAC TTTATTTGCT TTGGTGTTAG CAATTGGAAT TGTGGTTGAT
GATGCCATCG TTATTGTTGA GGGTGTGACT CAACATATTG AAAAAGGCAT GTCACCTAAA
GAATCAGCCA TACTTGCAAT GAAAGAATTA TTTGGCCCGA TTATTGGTAT CACTTTGGTA
TTAATGGCTG TTTTTGTACC GGCCGGTTTT ATGCCTGGTT TAACGGGGTC AATGTATGCA
CAGTTTGCTT TGGTTATTGC TGCAACTGCC TTTATAAGCG CAATTAATGC CATGACGTTA
AAGCCGACTC AATGTGCTTT ATGGTTAAAG GCTCCTGATA CGAGTAAACC AAAGAATATA
TTCTTTCAGG CCTTTGATCG AATTTATAAT CCCATTGAAT CGGCTTACGT AAAGTTTATT
GATCGGCTTG TACATCGTAG TGGTAAAGTT TGTTTGATTG GAATCATTTT AGTGGCTTGT
GCCATTTATG GCCTGACGCG TATTCCAACT GGCTTTATTC CCATGGAAGA TCAAGGCTAT
TTGATGTTAA GTATCCAGCT ACCGGATGGC GCCAGTTTAG GCCGTACTGA TGAAGTAGTG
AGTAGATTAG CTAAAAAAGC ATCTGAAGTT GGGGGTGTAG ATAATGTGAT TGCTATTGAT
GGTATTTCAT TATTGGATAA CAATTCTCTG CTTTCTAATG CCGGTGTCAT CTATGTTATA
TTCAAAGATT GGAGTGTCAG AGGAAAATCT GAAAATTTAC GAGCTCTTTA TACCAAATTC
AATGCAATAG CCAAAGAAAC CCTTGATGCA AAAGTGTTGG TGGTTGTGCC CCCTCCCATT
CAAGGTTTAG GGATGTCGGG GGGATTTCAA ATGCAAGTTG AATTACAAGA CGGTACTTTT
GATTACAGGA AATTACAGCA AGCTACTGAT CAAATGATCA ATACAGGGCG TCAATACCCA
CAGTTGCAAA ACCTTATGAC GACATTTCGT GCGAGTGTAC CCCAAGTTGC AGCACCTATT
AACAGAACCA AAGCCGAATC TTTAGGAGTG CGTGTTGCTG ATGCCTTTGA TACTTTACAA
ACTTATTTAG GCTCTTCTTA TGTCAATCTG TTCACGAAAT TTGGCCAAGT ATTTCCAGTT
TATGTTCAGG CAGATGCATC CTCGAGGATT AGCAGCGAAG ATTTAAGGAA TTACTATGTA
AGAAATCAAT CCGGCTCCAT GGTGCCCTTA GGTACTCTTA CAGACGTGGG GCCTGCGGTA
GGACCCTCAA TTATTTCTTT ATATAACCTT TATCCATCAA GCAACATAAA TGGGGTTGCT
GCAAGAGGTT ATAGCTCGGG GCAGGGAATC CAGGTGATGG AGGAATTGGC AAAGGAACAA
TTACCCCCAG GGATATCTTA TGAATGGACA AGTACAGCTT ACCAGGAAAA GGTGGCTGGT
AACCTCAGTT ACTTTATTTT TGCCTTGTCT TTGGTTTTGG TTTATTTAAT TTTATCTGGC
CAGTATGAAA ACTGGCTTAT TCCATCTGCG ATTATTCTGA GTGTTCCTTT GACTTTGGTT
GGAACAGTAT TAGCTCTCGG CAGTTTGGGT ATGGATAATA ATATGTACAC TCAAATTGGC
TTGTTACTTC TCATTGCATT GGCTACAAAA AATGCTATTT TGATTGTTGA GGTAGCGCGT
GAACAACGTG AAATTCATAA TAAATCAGTT CTTGAGGCAG CGGTCATTGG CGCCAAAACA
CGTTTTCGTC CTATTCTGAT GACATCTTTT GCATTTATCA TGGGGGTTAT GCCTTTGGTT
TTTGCAACGG GGGCAGGTGC CAATTCTCGT CGCTCAATTG GTATAGCGGT GAGCAGTGGT
ATGCTTGCCT CAACTTGCCT TGCAGTTGTT TTTGTGCCTG TTTTTTATGT ATTGTTGCAA
ACCTGGCAGG ACAAGAGGAA GGCAAAACAT TAA
|
|---|
| Protein sequence | MISKFFIERP VLANVIALFI VFIGIIAIAV LPVSQYPAIV PPTIQVTTTY PGADAKTLIN
TVALPIEQQV NGVEDMLYMQ STSTSGGTYT LIVTFAIGTD LNYAQVLVQN RVQAAMAQLP
ESVQKQGVVV QQKSTAILQF ITLTSKNNEY DGVFLDSYAT INMQDELSRL PGVGNVVVFG
SGSYAMRVWL DPKKMLAFSL NPSDVLNAIS YQNKEVSAGQ LGAPPTVGKQ AYQFTVNVPG
QLSDPKEFEN IIIKTIDTPP DQNSSASSSA QVVRIRDVGR VELGSESYNQ LANLNGKPTA
AIGIFQLPGA NALDVAQEVR KAVAKMAKQF PPGLEYSIPF DTTVFVKASI EEVYKTLFEA
GVLVLIVIIV FLQNFRASLV PATTVPVTII GTFFAMLLLG YSINLLTLFA LVLAIGIVVD
DAIVIVEGVT QHIEKGMSPK ESAILAMKEL FGPIIGITLV LMAVFVPAGF MPGLTGSMYA
QFALVIAATA FISAINAMTL KPTQCALWLK APDTSKPKNI FFQAFDRIYN PIESAYVKFI
DRLVHRSGKV CLIGIILVAC AIYGLTRIPT GFIPMEDQGY LMLSIQLPDG ASLGRTDEVV
SRLAKKASEV GGVDNVIAID GISLLDNNSL LSNAGVIYVI FKDWSVRGKS ENLRALYTKF
NAIAKETLDA KVLVVVPPPI QGLGMSGGFQ MQVELQDGTF DYRKLQQATD QMINTGRQYP
QLQNLMTTFR ASVPQVAAPI NRTKAESLGV RVADAFDTLQ TYLGSSYVNL FTKFGQVFPV
YVQADASSRI SSEDLRNYYV RNQSGSMVPL GTLTDVGPAV GPSIISLYNL YPSSNINGVA
ARGYSSGQGI QVMEELAKEQ LPPGISYEWT STAYQEKVAG NLSYFIFALS LVLVYLILSG
QYENWLIPSA IILSVPLTLV GTVLALGSLG MDNNMYTQIG LLLLIALATK NAILIVEVAR
EQREIHNKSV LEAAVIGAKT RFRPILMTSF AFIMGVMPLV FATGAGANSR RSIGIAVSSG
MLASTCLAVV FVPVFYVLLQ TWQDKRKAKH
|
|---|
| |