Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | lpp2398 |
Symbol | |
ID | 3118697 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Legionella pneumophila str. Paris |
Kingdom | Bacteria |
Replicon accession | NC_006368 |
Strand | + |
Start bp | 2742331 |
End bp | 2744349 |
Gene Length | 2019 bp |
Protein Length | 668 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637581099 |
Product | hypothetical protein |
Protein accession | YP_124708 |
Protein GI | 54298339 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
TIGRFAM ID | [TIGR03743] conjugative coupling factor TraD, SXT/TOL subfamily [TIGR03754] conjugative coupling factor TraD, TOL family |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TGGAGATAAA TCATGAGCCA ATATCCCGTT GAAAACCTTT TGCGTGAACC CACTGAATTC TATACCTTTC TGACCTGCAC TTCACTGGCA TGGCTAACTG TCGCCAAACC ACACCTGTTT TTACTCACTC AAGACATGGG AGTCTATGCA GCACTTAGCC TTATGACATT GGGTCTAGTT AGAGGATGCC AGGCCTTCCG CATCAAGCGT TATCACCGCA GGCTTATTGC TATGCCTTAT TATGCTTTGT CCACCACGGA AGTGCCATTA TCAAAGAAAT GGTTGTTTCT TGGGAAAGGG TTTCGTTGGT TGCCTCATCA TACGCAGCGA TTACATCAAA TTAAACAAAT TAGAAATGAA TTATTTATGC AACGAAATAC GTGCTATCGC AAAATACGTG ATTATTGCAA AAACCACGAA AGTTCATTAT TGACCCAACT GTTTAATACT CCATCAAAAT TCAATCCATT CAAATCTGAT CCACCTGTAG GTGGCAGCTC ATACCTACAT GGGTTAGGTG AAAAAGATAG TTCTGTCTAT ATCCCGCAGG AAGTTCGAGT TGGTCATACT TTTGTAGTAG GTACAACTAG AGTTGGTAAA ACACGCCTGG CAAGCATCCT AATCAATCAG GATATTAGAA ATGGCGATGC AGTGATTGTC GTTGACCCCA AAGGAGATTT AGATTTAGTT CGTGATATGT ACTCAGCCTG CAAGGCTAGT GGCAGATTAC ATGATTTTAG AGTGGTGCAT TTAGGTTTTC CTGAATTGTC TGCTCACTAC AATCCGCTCA AAAACTATGA TCAAGTCAGT GAGGTTGCTA CACGTGTTAC CGATGCGATT CAAGCTGAGG GCGAAGGAAA ACAGTTTGCA GCCTTTGCCT GGAAATACGT GAACATTGTA GCGATTTGCC TTGAAGAAAT GAAACAACTT ATTTCTTACA CTTCTATAGG GTTTTACATC AATCGATTGG ATCAACTACT AATGGCCTAC TCTGATGCCA TACTCCCCAC ACATAATCCA AATTATCATG AAAAAATAGA AGAAATCATC GCTAATAATG ATTGCCGTGT AGATAAATAC GGCAATACTC CGCCGCCTAT GAGCCGCTCA AAGGCGGTGG TGAAATATTT ACAAGAGCAT ATCAGTAAAA CCATCACTTC AGGCAACGTT GAAAGCCTTC ATGATCAAGT ACTCATTGAT CTGTTTGATG CGGCCATCAT GGACAAAAAT TATTACGATA AAATCACGGC CAGTGTCGGC CCTGTGTTAT CAGAAATTAA TAAAAGTAAT GCATCAAAGA TCTTTTCATT TCATAAAAGC AATTGTGAAA TCGAGTTGAT GAGTGCAATA AAAAACAAAC AAGTCATCTA TATCGGACTG GATAGCTTAA CAAACCCCAA TATCGCCCAA GCAGTAGGTA AAGCCTTTTT GTCAGATTTA GTATCCACAG CTGGAAAAAT ATATAAGGAA AGTAACGCTA ATTACCGTCT CAATTTACAT TGTGATGAGC TTTCTGAAAT CATCCAGGAC TCGTTTGTCA AAATTTTAAA TAAAGCAGGT GGAGCCGGTT TTCAAGTCAC CGCTTATGCT CAGACCAAAC AAGATATGGA GGTGGCACTA GGCTCAAAAG CCAAAGCAGA AGTGACTGAA GGAAATCTAA ACACCCTCAT CATGTTACGA GTCAAAAATG AAGAAACAGC CAATTTATTA GTCAAAGTTT TACCAAAAAT TGGCGTAATC GAACACACTC AAGTGTCCAT GGTCAACGAC ACACCCCATG GCGAGGATGG AGTTTATTTT AACACCACCA ATGAAGATCG AGTACAAACA ACCGCAGTAC CTATGATTGA TGTCAATGAC ATTATCTCAT TGCCCAAAGG GCAAGCCTTT GTTTTAGTGA ATGGCGGAGA GCTGTACAAA GTAAGAATAC CCTTACCTGT GAACGATGGA TTAGCCCCCA AGGATATCAA AAGCGCTATT CGTGCAATTA ACCAATTGGA TGATAACCTT GGAGATTAA
|
Protein sequence | MSQYPVENLL REPTEFYTFL TCTSLAWLTV AKPHLFLLTQ DMGVYAALSL MTLGLVRGCQ AFRIKRYHRR LIAMPYYALS TTEVPLSKKW LFLGKGFRWL PHHTQRLHQI KQIRNELFMQ RNTCYRKIRD YCKNHESSLL TQLFNTPSKF NPFKSDPPVG GSSYLHGLGE KDSSVYIPQE VRVGHTFVVG TTRVGKTRLA SILINQDIRN GDAVIVVDPK GDLDLVRDMY SACKASGRLH DFRVVHLGFP ELSAHYNPLK NYDQVSEVAT RVTDAIQAEG EGKQFAAFAW KYVNIVAICL EEMKQLISYT SIGFYINRLD QLLMAYSDAI LPTHNPNYHE KIEEIIANND CRVDKYGNTP PPMSRSKAVV KYLQEHISKT ITSGNVESLH DQVLIDLFDA AIMDKNYYDK ITASVGPVLS EINKSNASKI FSFHKSNCEI ELMSAIKNKQ VIYIGLDSLT NPNIAQAVGK AFLSDLVSTA GKIYKESNAN YRLNLHCDEL SEIIQDSFVK ILNKAGGAGF QVTAYAQTKQ DMEVALGSKA KAEVTEGNLN TLIMLRVKNE ETANLLVKVL PKIGVIEHTQ VSMVNDTPHG EDGVYFNTTN EDRVQTTAVP MIDVNDIISL PKGQAFVLVN GGELYKVRIP LPVNDGLAPK DIKSAIRAIN QLDDNLGD
|
| |