| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | lpp2373 |
|---|
| Symbol | helC |
|---|
| ID | 3119247 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Legionella pneumophila str. Paris |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_006368 |
|---|
| Strand | - |
|---|
| Start bp | 2723646 |
|---|
| End bp | 2724890 |
|---|
| Gene Length | 1245 bp |
|---|
| Protein Length | 414 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 637581074 |
|---|
| Product | HelC protein |
|---|
| Protein accession | YP_124683 |
|---|
| Protein GI | 54298314 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1538] Outer membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTATTT ATTTTTATTT AGTTATTGCA TGGATGAACC TCATGGCTCA TGAAGCTGTC
GCATCATCCT CATTTACTTT CAAGGACGCT TTGGCAATTG CATATCGGAA TAATCCGGAA
TTACAAGCTG AAATAGATAA AGCTCAGGCC ATGCGTGGAT ATTTTGTACA AAGCGGGCTT
TACCCTAATC CACAACTTAC CTTAACTGCC GAGAATTTTG GCGGATCTGG CAGTTATTCC
AGTTACGAAT CTGCTGAAAC TACCGCATCA GTGACACAGC CCATTCCTTT AGGTAATCGT
TTATCTTATT TGAAAAAAGC CAGCTATGCA GATTATTTAG CCTCATTAGC ACAAATTCAA
GTCCAAAAAG CAGTGATTTA TATGGCTGTT GGTGGCGCAT ATGTCGATGC ATTGTATGCC
GGACAATGGC ACCAGGTAAC TAAAAAGCTT ATTTCACTCA ATGAGAGTAT CGTTAAAGCA
ATTGAGCGGC GTGTTAAAGC GGGTGCGGGA GCTGAATTGG ATTTACGTTT AGCTCAAATT
CGATTGGGTG AATCGCGCAT TCAAGAAAAA AAAGCGGCAC GTGATGAACT GTCACAACGT
GCTAAATTGG CTCGTTTATT AGGTATCGGA TTAAGGGTGG ATCAACCATT AGTAGATAAA
GGGCTACCTG ATGTTACATT AAATTGGTCA GTGCTTTTAA AAAAATTACC TCAAAGCCCG
CAATTGATAC AAATGCAACA ACAACTAAAA GCCAAACGAG CAACCATTAC AGCAGTTAAA
AAATCCGTTT GGCCCGATTT AAACATTCAA TTGGGCGCCC GTCATTTTTC TGATGATGGA
AGCAATGCTG CAGTGATGTC GGCTTATGCA CAAGTTCCTG TTTTTGATCG CAACCAAGGA
AAAATAATGA CAGCGGAAGC GCAATTCACG CAAACTTCGC ATGAATACCA GGGAACAAAG
CTCGATATAC GTCAAACAGC ATATACTGTA TTTTTACAAG CCCAACAAAG TCATTATGAA
GCAGAATTAG TAACCAGTAC TTTGTTACCA CTTGCTCGTA AATCAATAAA ACTCGCTCAA
GATGGCTATC AAATGGGACG CTATACCTAC ATTGAATTAT CTACAGCCTT AAATGCTTTG
TATGAAGAGG AACGACACTA TCAACAGGCA CATGCAGATT ATCATAAAAC ATTAATTCAA
CTCACAGGGC TTTTAGGTCT TCATCCTACC AAGGAGAGTA AATGA
|
|---|
| Protein sequence | MRIYFYLVIA WMNLMAHEAV ASSSFTFKDA LAIAYRNNPE LQAEIDKAQA MRGYFVQSGL
YPNPQLTLTA ENFGGSGSYS SYESAETTAS VTQPIPLGNR LSYLKKASYA DYLASLAQIQ
VQKAVIYMAV GGAYVDALYA GQWHQVTKKL ISLNESIVKA IERRVKAGAG AELDLRLAQI
RLGESRIQEK KAARDELSQR AKLARLLGIG LRVDQPLVDK GLPDVTLNWS VLLKKLPQSP
QLIQMQQQLK AKRATITAVK KSVWPDLNIQ LGARHFSDDG SNAAVMSAYA QVPVFDRNQG
KIMTAEAQFT QTSHEYQGTK LDIRQTAYTV FLQAQQSHYE AELVTSTLLP LARKSIKLAQ
DGYQMGRYTY IELSTALNAL YEEERHYQQA HADYHKTLIQ LTGLLGLHPT KESK
|
|---|
| |