Gene lpp2244 details

Gene Information

• Locus tag: lpp2244
• Symbol: rne
• ID: 3119644
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Legionella pneumophila str. Paris
• Kingdom: Bacteria
• Replicon accession: NC_006368
• Strand: +
• Start bp: 2578804
• End bp: 2580795
• Gene Length: 1992 bp
• Protein Length: 663 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 637580946
• Product: ribonuclease E
• Protein accession: YP_124556
• Protein GI: 54298187
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG1530] Ribonucleases G and E
• TIGRFAM ID: [TIGR00757] ribonuclease, Rne/Rng family

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAAAAA TGCTAATCAA TGCAATGCAA ACAGAAGAAA TTCGTGTTGC ACTAATTAAA 
AACAATCAAT TATTTGATCT GGACATTGAA TGCCCGGGAG AAATAAAGAA AAAAGGTAAT 
ATTTATAAAG CCATAGTAAC AAGAAGAGAA CCCAGCCTTG ATGCTGTTTT CGTTGAATAT 
GGTTCCAAAC GCCAAGGTTT CTTACCCCTA AAAGAAATAG CGCCTGAATA TTTAAGCAAG 
AATCCGGAAG AATTTGGAGA TGAGAAACCT CCAATTACCA GCCTCATCCG TGAAGGTCAA 
GAATTACTTA TCCAAGTGGA TAAAGAAGAA AGAGGGAATA AAGGAGCAGC ACTGACAACT 
TTTATTACCC TGGCAGGTTG CTACCTAGTT TTAATGCCCA ATAACCCTCA TTCGGGCGGA 
ATATCAAGAC GTATTGAAGG TGATGAGCGT GATGAACTAC GTGAAACATT AAATGCTTTA 
ACCCTCCCTG AAGACATGGG TCTTATTATT CGCACTGCAG GTGTTGGAAA AAGTCTGGAA 
GAACTGCAAG ATGACTTAAA CATGCTTTGC AATCAGTGGC AATCCATCAA GGAAGCTTAT 
AATTCGGAGC TGGCACCTTG CCTGATTCAT CAAGAGGGCG ATGTCATTAT TCGTTCCATT 
CGTGACAATT TGCGAAAATC CATCAGTGAA ATTATTATTG ATGATCAAAT ATCCTATATC 
AAAGCAAAAC AATACATTGA ACGCGTAAAA CCAGAATTTT TACCTAATCT AAAACTCTAT 
AACAGCAGCA TCCCTCTTTT TAATTTCTAT CAAATTGAAA GCCAAATTGA GACCGCTTAT 
CAACGCCAGG TCATGCTTCC TTCTGGAGGT GCCTTGGTCA TAGATAGAAC TGAAGCTCTG 
GTATCAATTG ATATTAACTC GGCCAAAGCT ACAGGCGGTG CCGACATCGA AGCGACTGCA 
TTAAATACCA ACCTTGAAGC AGCTGATGAA ATTGCTCGCC AGCTTCGCCT GCGTGATTTA 
GGTGGTTTGG TAGTTATTGA TTTTATTGAC ATGAGTTCTA GTAAAAATCA AAGAGAGGTA 
GAAAATCGAC TCAAAGAAGC ACTGCAGGCT GATAGAGCCA GAATTCAAGT AGGGCGAATT 
TCACGCTTTG GCCTTCTTGA AATGTCACGG CAACGCCTCC GGTTATCATT AGGAGAAACC 
GCCCAGGAAA TTTGTCCACG TTGTGAAGGT AGAGGAACTG TACGCAGTAT ACAGTCCCAT 
GGCTTATCAA TTACCCGCCT TATTGAAGAA GAAGCGCTCA AGGAAAAAAC AGCTGAGATT 
CAAGTGCAAT TGCCGCCAGA AATGGCTACG TTCATTATGA ATGAAAAACG TAATTTTATC 
AGGGACATTG AAAAAAGGCA TGGTGTCAGT GTCGTTGTTA TTGCGAATCC TTATATGCAC 
CCTCCACAAT ATACGATTAC TCGTCTGAAA GAAGACAACG TAGGCAAATC TAAAAAACCA 
AGTTACTCTT TGATTCAGCA ACCTGAAATA CATGTTCCCA GCAGTGATAA AGAACCCGTG 
TCACATGATG AGCCTGCTGT GAAATCATTT GCCGAACACA GGGTCATCAA ACACCCTCAA 
ACCAGTTTCA TTAAACGATT ATGGACCAGT TTATTTGGTG GTCATTCAGT TGCCCACACC 
GTAACTCAAG AACCCGGTAA AAAACATCAT CGTGCTCAAA ATCAAGGCAA ACACCCATCT 
TCCAAAAGCT CAGGAGGAGA CAAACGTCAA CAAGGCAGCA ACGCAAATCG TAGACGTCGT 
TCAGGAGGAG GCCAGCAACG TTCTTCATCG GGAAATACAA ATGCTGCAAC CAGCGCACAC 
CAGCAACGAA AAAAATCCAA CCCGAATCAG CAAAGTCATG GTGGCCAACA AAGCAATCGT 
TCAATTCCTG CAAAAAATGA AGGCAACAAA AAAAGGGAAG CCATACTGGC TAAAGAGCCA 
GAGGAAAAAT AG 

 

Protein sequence

MEKMLINAMQ TEEIRVALIK NNQLFDLDIE CPGEIKKKGN IYKAIVTRRE PSLDAVFVEY 
GSKRQGFLPL KEIAPEYLSK NPEEFGDEKP PITSLIREGQ ELLIQVDKEE RGNKGAALTT 
FITLAGCYLV LMPNNPHSGG ISRRIEGDER DELRETLNAL TLPEDMGLII RTAGVGKSLE 
ELQDDLNMLC NQWQSIKEAY NSELAPCLIH QEGDVIIRSI RDNLRKSISE IIIDDQISYI 
KAKQYIERVK PEFLPNLKLY NSSIPLFNFY QIESQIETAY QRQVMLPSGG ALVIDRTEAL 
VSIDINSAKA TGGADIEATA LNTNLEAADE IARQLRLRDL GGLVVIDFID MSSSKNQREV 
ENRLKEALQA DRARIQVGRI SRFGLLEMSR QRLRLSLGET AQEICPRCEG RGTVRSIQSH 
GLSITRLIEE EALKEKTAEI QVQLPPEMAT FIMNEKRNFI RDIEKRHGVS VVVIANPYMH 
PPQYTITRLK EDNVGKSKKP SYSLIQQPEI HVPSSDKEPV SHDEPAVKSF AEHRVIKHPQ 
TSFIKRLWTS LFGGHSVAHT VTQEPGKKHH RAQNQGKHPS SKSSGGDKRQ QGSNANRRRR 
SGGGQQRSSS GNTNAATSAH QQRKKSNPNQ QSHGGQQSNR SIPAKNEGNK KREAILAKEP 
EEK