| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | lpp2223 |
|---|
| Symbol | lidB |
|---|
| ID | 3117544 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Legionella pneumophila str. Paris |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_006368 |
|---|
| Strand | + |
|---|
| Start bp | 2557435 |
|---|
| End bp | 2560011 |
|---|
| Gene Length | 2577 bp |
|---|
| Protein Length | 858 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 637580922 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_124535 |
|---|
| Protein GI | 54298166 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3893] Inactivated superfamily I helicase |
|---|
| TIGRFAM ID | [TIGR03623] probable DNA repair protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATTGGC AAAAAATAAA TCAGAAGGAC ATGCCCATAA AGTTCACCGA TGAACTTAAG
TCAGATGAGC TTTATAATCT ATTGTCTCAA GGAGCAGTCG TTATTACTCC TAACAATAGA
TTAAGCGGAA CCATCCTTCA GAATTACTTC ACTTATTGTT CCAGAAAAAC AATTACCAAG
CCAATATGCT TGCCTTTTAA TACATTTCTA GTTAACTCTT TTGAACAACT CAAATTCCAA
AAACCAGACC TGGAACATCC CATACTTTTA AACTCTGCAC AATGCCAACA CTTATGGCGA
AAACTAATTA AATCTCATCC TTCTATCATT TACACGGAAG GCTTGCTTAA AACAATAATG
CAAGCATGGG AATACTGTGA GCAATGGCAA CTTACACCTG AAGCGCCTGC TTTTCACTAC
ACGCCGCAAA CACAACAATT TCAACAATGG TGGCAATCTT TTAATAAAAT ACTTAAAGAA
ATTTCTGCCA TCCATCAGCA TCAATTAATT CGCTACTTGC TTGATTCCAA TTACCAAGGG
CTCGTAAAAA CCGTTGTCTG GATGTGCTTT GACGACTTTA ATCCACAGCA GTTATCCCTG
CAAAATTATT TGAACGCGCA GGGGGTAATT CAATATGGTT ATGATTTAAA AGAAAACCAG
GAGACTCCGG AGGTTTTCTC AGCTAAAGAC AAAAAAACAG AATACCAGGA ATTGATGACC
TGGTTGGAGA AGAAAATTCA ACAAGGAAAA AAGCAAATCG GGGTTGTTGT GCCTAATCTT
GAACAAGAAT CATCGGTTTT GCAACGAGTT TTACGCGACT GCTTTGAACC CAATTTATTT
AATATTTCTT TAGGCAAACC ATTAAGCGCA TTTCACTTGA TCTCTCATGC CCTCATTTGG
CTAAGTCTTG ATCACAATCT CTTAAATAAT CATCAAGCAG CTTTGCTGCT CCAATCACCC
TACATTGGCA AGGCAAAAGA TGAGTTTCTT CAAAGATCAG ATTACTTACA GGAAAGCAAG
TTGTTGCAAG ACCAATCTTT CCCCACAAAA TTATTTATTG AGGACGTTGC CTACCACACG
CCTAAACTGG CTGAATTGTT AAAAAACATG AATTTTTATC CGGAAAAAAC TACCCTGGAT
GAGTGGATTG AGTTATTTCA GGAGAGGTTA AATGGCATCG GGTTTCCTGG TGATTATGTT
TTGAACTCAG AGGATTATCA ATGCTTTAAT CGCTTTACAA TGATTTTTGA CGAATTCAGA
CAATTAAGTC TGATAAGCAG CCATTTGACT AAAAAAGAGG CATTTGAAAC GTTAAAACAA
CTCATAGACA ACACTATTTT TCAACCACAA AAAAGCAATT CACCAATTCA AATTTTGGGA
TTGTTAGAGG CATCAGGTTG CGAATTTGAC AGCCTTTGGG TAATGGGATT GACTGATCGA
TGTTTACCTC AACAAACACG TTTATCGCCC TTTATCCCAT TTGAATTACA GCGTGAACTG
GGCATGCCTC ACAGTATGCC GGCAAGAGAG CTCCAATATG CCAAGCAAAT TTTGCAAAGA
CTGCAACGAG GCAGCATGGA AACTGTTTTT AGTTATCCAC AATTTGACGA TGACACGCCT
AATTTACCCT GCTCATTGAT TACTCATTAT CCTGCCTACC TCAGCCGGTC TGCTGACAAT
AAAACAAATG TTCAAAGTTG TTTGGTTCCT CTTGAAGAAA ACTATGAAGT ACCTGTAAAA
TCTGATGAAT CCATTTCTGG AGGAACCAGC TTACTAAGCA ATCAGGCCAA ATGCCCTTTT
AAAGCATTAG CACAACACCG ACTTAAGGCA AACCCTGTTC TAAAAACTAC AGATGGAATG
GATGACAAGG AAAAAGGTCA ATTAATCCAT AAAATCCTGG AGTTGCTCTG GCAAAGATTG
GAAAATCAGG AACACTTAAT TAAATTAAAA CCCGCTGAAC TTGAACGATT CATTGATGAA
GCAATTCAAG GCGCTTTAAA TCCGATTAGG CAACGACACT CCCAAGCTTT TCCTGACTTG
ATTGCCAATG TTGAATACAT GAGATTAAAA CGAATTATCT TGTCTTATCT GGAATGGGAA
AAGCAACGCC CTCCTTTTAA AATCACAGGC CTGGAAGAAA ATCATTCGAT CAATTTGGCT
GGGCTCGATT TTAAAGTAAG AGTGGACAGA CTGGATGAAG TAGGTAACAA ACAATGGGTC
ATTGATTACA AAAGCACCCT CCCTGGCGGC AAACCATGGA ATGAAGAAAG ACCAATGGAG
CCTCAATTGC TACTTTATGC GTTGCTTAAC GAACAAATTA ATACTTTGTT ATTGATTCAA
TTAAAAACCG GAAAAATCAA GCTCAGCGGT TTTAGCGAAG AAAAATGGGA AACCAAAGAG
ATTAATACTT TGAAAGAGGA TGAAAATTGG GAAGACTATC GACAACGCTG GCTAGAACAA
TTAACTCATT TAGCTGAAGA AATTAAGTCT GGCTATTGTC CGCCACGCCC TCAAAATCTG
ACCATTTGCC AACGCTGTGA TTTTCAGAAC TTATGTCGCT TCCAGGCTAA ACAATAA
|
|---|
| Protein sequence | MHWQKINQKD MPIKFTDELK SDELYNLLSQ GAVVITPNNR LSGTILQNYF TYCSRKTITK
PICLPFNTFL VNSFEQLKFQ KPDLEHPILL NSAQCQHLWR KLIKSHPSII YTEGLLKTIM
QAWEYCEQWQ LTPEAPAFHY TPQTQQFQQW WQSFNKILKE ISAIHQHQLI RYLLDSNYQG
LVKTVVWMCF DDFNPQQLSL QNYLNAQGVI QYGYDLKENQ ETPEVFSAKD KKTEYQELMT
WLEKKIQQGK KQIGVVVPNL EQESSVLQRV LRDCFEPNLF NISLGKPLSA FHLISHALIW
LSLDHNLLNN HQAALLLQSP YIGKAKDEFL QRSDYLQESK LLQDQSFPTK LFIEDVAYHT
PKLAELLKNM NFYPEKTTLD EWIELFQERL NGIGFPGDYV LNSEDYQCFN RFTMIFDEFR
QLSLISSHLT KKEAFETLKQ LIDNTIFQPQ KSNSPIQILG LLEASGCEFD SLWVMGLTDR
CLPQQTRLSP FIPFELQREL GMPHSMPARE LQYAKQILQR LQRGSMETVF SYPQFDDDTP
NLPCSLITHY PAYLSRSADN KTNVQSCLVP LEENYEVPVK SDESISGGTS LLSNQAKCPF
KALAQHRLKA NPVLKTTDGM DDKEKGQLIH KILELLWQRL ENQEHLIKLK PAELERFIDE
AIQGALNPIR QRHSQAFPDL IANVEYMRLK RIILSYLEWE KQRPPFKITG LEENHSINLA
GLDFKVRVDR LDEVGNKQWV IDYKSTLPGG KPWNEERPME PQLLLYALLN EQINTLLLIQ
LKTGKIKLSG FSEEKWETKE INTLKEDENW EDYRQRWLEQ LTHLAEEIKS GYCPPRPQNL
TICQRCDFQN LCRFQAKQ
|
|---|
| |