| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | lpp2092 |
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| Symbol | sdeC |
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| ID | 3117730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Legionella pneumophila str. Paris |
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| Kingdom | Bacteria |
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| Replicon accession | NC_006368 |
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| Strand | + |
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| Start bp | 2372412 |
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| End bp | 2377026 |
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| Gene Length | 4615 bp |
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| Protein Length | 1533 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637580790 |
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| Product | SdeC protein, substrate of the Dot/Icm system |
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| Protein accession | YP_124404 |
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| Protein GI | 54298035 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0419] ATPase involved in DNA repair |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GGGAGAAAGT AAAATGCCTA AATACGTAGA AGGGGTAGAA TTAACTCAAG AAGGTATGCA
TGCTATTTTT GCTCGTATGG GGCATGGCGA TATTACCAGC GGTAGCATTT ATAATGGAGT
ACCGACTATT GACACAGATG CCCTGAACAG GCAAGGCTTT ATGCCCGTTT TAACCGGAGT
AGGCCCCAGA AGAGACTCCG GTCACTGGAT CATGTTAATC AAAGGGCCTG GTAATCAATA
CTTTCTCTTT GACCCACTAG GTAAAACATC AGGCGAAGGT TATAAAAATA CTTTATTAGC
CCAATTACCC ATAGCATCTA CTCTTTCTGT TATTCCCAAT GAGCCCGGCC TAAACATGGG
GCTATGTGGC TATTGGGTTG CTTCTGTTGG GCTAAAAGCT CGTGCTGAAC TGAACAAAGA
CAATCCCCCT GATTTAGAAA CCCTGGGGCG AACCACGACA GAGGAAATGA GAAATGAATT
AACCGATAAC GGTTATCTGA AAATTACCGG CTGGTTAAGG GCTGTCTCTG ATAAATTTCC
AGCAGGTGAT CCCCAACCTG ATGCGAAAAC ATTAAGAGAA ACTACCGAAA AAGATTTACA
CATAGAGATC CCCTCTCCTG TTCCTCCAGT CAAAGACAAA GCTCCTAAGG AAGTTTCTAC
AAAACCTACT GCACCACAAG TAGCTCCCAA GCATTCTTTA GACAGTAAAT TATTAGAGAA
TGACGAAGAC GTTCTAGACA CCATAAAATA TGTACATAAA GAGTATTTAG GAAAACCATA
TCCTGGCCCA TTAAAAAATC CAAAAGCACC GGAAGAAGGA CGACTTCCTC CAAATGAAGG
GCCAGATCGA GGACCTCATG GCCTTGCTCA TACGGTAAGA ACAATGGCTT GTGCTGAGGT
GATGATAGAA GAAGCACGCA AAGCTCAGCT AAGAGGAGAG ACATTAGGTA AAGCAAAAAA
TGGTCAGACT TTAGCTGATG TAACTCCAGA GGAACTGAAA AAAATTCTCA TCGCACAAGC
CTTTTTTGTG GTAGGAAGAG ATGATGAACG TTCCGGCTAT GATGACGTAC ACAAGAGAAA
TTTCTACGCG GAATATCATG AGAAAAGCGA GCAAGCGTTC AGGAAATACG TTGAAGATAA
CAAGCTCATC GGCAAAATCT TTAAAGATCA AAAAGAAGTC GATTTCTATG CCGCGATTAT
TCTGGATAAA AATCATGAAT GGGATGCCTC CCCGGCACAT ATCCTGATAA ATCAAGGCCA
TATGGTAGAC TTAATGAGAA CTAAAGCACC TGCTGAAGTC GCATTGGAAC GTACCTACAA
TACACTGAAA GGTACCGTCG GTTCGAAAAG TGCTGAAGTC GTCCTCAAGG CCCATCGAGA
TTTTTTCTTT GCTACAGGCG CTGTTGTTCC CTTAGTAAAC CCTGAAGCAA TTGATGACCC
CAGTAGAGGT GGACCTTATG AAAATCCTTA TAGCGGGGAG AAATTTGTTA TTGTTGATGA
TAAGGTACCA GCTTCCAAGA AAGACTTACC AAAAGCTGTA AATCGTGACT ATAAACTGAA
AGATAACGAA CGATTCCTAA CCATAAAGGA ATACTACGCT TTTCCTGATG TGCAGCAAAC
CTACCCTGGT TACAAAACGC GTTTGGAAGG AAGCTCTTAC TATTTCCCAA CACCATTTGC
AGGAGAATGC GAGCACGACC CTGCAAAATG CCTGGGGGCT ATCCAAAAAG CCCGTTCAAA
ACTACAAACG GATGCCATTA AAAATGGTTT TCAATCCAGC TCTGATAAAC AGAGAAGACA
ACCCAATATG GATGAAATTG CGGCCGCCCG CATCATTCAG CAAATCATGG CCAATCCGGA
TTGCATTCAT GACGATCATG TGCTCATCAA TGGCCAGAAA CTGGAAGAAA AATTCTTCCG
TGACTTGTTA GCCAAATGCG ATATGGCTGT TGTAGGCTCA TTGCTCAATG ACACCGACGT
CAAGAATATT GATACTTTAA TGCGACATGA GAAAGACACC GAGTTTCACT CTACCGACCC
CAAAGCAGTT CCAGTAAAAA TTGGAGACGC TTGGGAAAAT AGAATAAGAA CCAAAGGTGG
CGATGTCACT CAAATGAAGC ATGATTTAAT TTTCCTCATG CAAAATGACG CCTGGTACTT
TAGTCGAGTC AATGCCATTG CACAAAACCG GGATAAAGGC TCCAATTTCA AAGAAGTGCT
GTTTACCGCA TTAATGACGC CATTGACTAA TAAATCATTA ATGGATACAT CCCACGTCCC
AGCTCCTAAA AAACTGTATC GTGGATTAAA TCTGCCACAA GAATTTACCA ATAAATTAAT
CAATCAAGCC AATGCCATTA TTGCCAATAC AGAAAATACG CTTTTTACTG ATCTCTCTGC
TGAAGGCTTC AAACAAATCA AGTTAAATGA TTTTAGCCAA ATGTCTGGTA GAACCTGCGC
CAGTACAACC AAAAATATGA AACTTTTAAC CGATATATGG GGATCCAATG TCATTTTTGA
AATGCTTGAC CCGGATGGTT TACTGCATCC AAAACAGGTA GGAACTCATA TGGCTGGGTC
TGAAGATGAA TTTTCCGTTT ATTTGCCGGA AGATGTCGCT TTAGTTCCAA CCAAGGTAAC
TCTTGAAGGA AAAACAGACA CAGGGGAAGA TCGGTATATC TTTACACTGG TTGCCGTAAA
AAGTCCTGAC TTTATCCCTC GCCATGACAG CGGCTATGCG GTTGAGCCCT TCATGAAAAT
GCAAAAAGAG AAAGTCACTC AGGCATTGGA TGCCATTGAA AAGGATAAAG GCAGCTATAA
CATCGACGAA CAACTAAAAA ATCTAAGAAT AGAAATGGTA CGGCAAGCCA AGTTGCCTCT
TAGAGAAGGG ATTTTTGATA GACTCTCTCA TCGTCTTTCT CTGGAAACCA GTGATAACAA
AATATCACCT GAACGCAGAG ATTTTCTTAA CCAACACGTC ATCCCTGTAT TACAGGAATG
CCATATCGCG CTTAGAACAA ACAATATGGA GATGATGCAG AAGGCTTTGG CAAAATTCCC
TACCGATAAG CAATGGTCTG CTTTTAAATC AGGAGAAGCA GTCAGAGCCA AAGCTCAAAT
GGATGTATTA AAGCAACAGA TTGAAAAGAA AATCATACTG CAAAGCCAAA TTATCCCGGC
TCTCACGGAA TGTAGTGAAG CGCTGGATAA ACAAAATGTC ACAGAAGCAT TACAAGCGCT
CAATAAACTG CCTGCAGAAA AGGAAATAGG CAAGGTCAAG ACAATAGGAC AAGAGTTAAG
AGGGCAAATC GTTGGTGTCA AGCAAGAGCT AACTGGAAAT CTTGAATCCA TGCAACGTGC
AACCACTGCG CCAATCTTAC AAGATGCTGA AAAAATGAAA GTACGGTATG AAACCCTTGT
CACAGACGTG ACAAAACGAG TCACCGACTT TGAAAAAATC AAACCGGCCA ATCTTGACAG
TTACAACAAA GCCATTGCCG ATTTAAATAA CATGCAACAA GAATTAACCC TTCTGCGCAA
TGAAAAAATT CGCATGCATA CTGATAAAGA CAAAGCAGTG GACTTTTCAG ACATAGAAGC
ATTAGAAAAA CGATTACAAG ATGTTCAATC CAAATTGCCA ACTCAACTTT TAGAGCAAAC
GTCCAAAGAT GTTGCAAAAT TAGCAAAAAT GCCGGAAAAG ATTACCTTTA ATGACATCAA
ATCAATGACA TCCAAAATGA ATAATTATCT GGAAACATTG GAATTGATTC GTAATGACAG
GATCAAGAAG CATGCTGGAT CTACCGACCC TCTTGATATG TCGGATTTGG ATGAATTAAA
AGGTCAACTG CAAACTTATA ATCAAAGCAT GGCTGATATC CTATTGCGTG CTGCCAAAAG
TTCTCTAGAC AAAATTAAAG ATCCAGCTAC TTTTGAAAAG GAATCCCCAT ACATCAAACA
ATGTTTTGAT CATTTAGCAG AACTTGAAAA AACACTCGAT GATTCAGACA AGGGAAGAAA
ACAAAAAGAA GACTTTACTG CCTATAAAAG CGCGTTAATG GATAAACAGG AAAAGGCCTA
TCCAGAAATG CTACAGTTAC AATACAAGAG TGAAGCATTG ATTATGCAAT TACGTGATAT
CTGTAAAATT CACCATGACA ATTTAGCTGA AGCAAGAAGA GTGAGACTTC AACAACTAGA
TAGTCAGGGA GGCGGGCTTT TAGGTGGATT ATGGACTGTA ACCAACACCA TAGGTCTTAC
TACAGACACT GTGAATATTG AAAGAATGCA GATTAGAATG AAGGAGCAAA CTCTTAGAGC
ATTTAAGACA GAACTTACTA ATGACAAGCT TAATACGGAT CAAGTCATTG CCTTTTTAGC
AAAAGGAAGT CCATCTGAAT TGCAAGAAGC TTTAGGAATA TCAAAAGAGA ATGCAGAACA
ATTGCATGGA TTGCTAAAGC AACTGGAGAT TAAAACAGCA TCAACCGATA AACTCCAGGA
AGTTGAAAAG CTAATTGATG AAGTCTCAAC TAAAATAGGG AAAGAACCAG TAAAACAAGA
TCACACCATC ACAATAGATG AGGAAGAAAG CCATGACGTG AGGTATGATT TCTAA
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| Protein sequence | MPKYVEGVEL TQEGMHAIFA RMGHGDITSG SIYNGVPTID TDALNRQGFM PVLTGVGPRR
DSGHWIMLIK GPGNQYFLFD PLGKTSGEGY KNTLLAQLPI ASTLSVIPNE PGLNMGLCGY
WVASVGLKAR AELNKDNPPD LETLGRTTTE EMRNELTDNG YLKITGWLRA VSDKFPAGDP
QPDAKTLRET TEKDLHIEIP SPVPPVKDKA PKEVSTKPTA PQVAPKHSLD SKLLENDEDV
LDTIKYVHKE YLGKPYPGPL KNPKAPEEGR LPPNEGPDRG PHGLAHTVRT MACAEVMIEE
ARKAQLRGET LGKAKNGQTL ADVTPEELKK ILIAQAFFVV GRDDERSGYD DVHKRNFYAE
YHEKSEQAFR KYVEDNKLIG KIFKDQKEVD FYAAIILDKN HEWDASPAHI LINQGHMVDL
MRTKAPAEVA LERTYNTLKG TVGSKSAEVV LKAHRDFFFA TGAVVPLVNP EAIDDPSRGG
PYENPYSGEK FVIVDDKVPA SKKDLPKAVN RDYKLKDNER FLTIKEYYAF PDVQQTYPGY
KTRLEGSSYY FPTPFAGECE HDPAKCLGAI QKARSKLQTD AIKNGFQSSS DKQRRQPNMD
EIAAARIIQQ IMANPDCIHD DHVLINGQKL EEKFFRDLLA KCDMAVVGSL LNDTDVKNID
TLMRHEKDTE FHSTDPKAVP VKIGDAWENR IRTKGGDVTQ MKHDLIFLMQ NDAWYFSRVN
AIAQNRDKGS NFKEVLFTAL MTPLTNKSLM DTSHVPAPKK LYRGLNLPQE FTNKLINQAN
AIIANTENTL FTDLSAEGFK QIKLNDFSQM SGRTCASTTK NMKLLTDIWG SNVIFEMLDP
DGLLHPKQVG THMAGSEDEF SVYLPEDVAL VPTKVTLEGK TDTGEDRYIF TLVAVKSPDF
IPRHDSGYAV EPFMKMQKEK VTQALDAIEK DKGSYNIDEQ LKNLRIEMVR QAKLPLREGI
FDRLSHRLSL ETSDNKISPE RRDFLNQHVI PVLQECHIAL RTNNMEMMQK ALAKFPTDKQ
WSAFKSGEAV RAKAQMDVLK QQIEKKIILQ SQIIPALTEC SEALDKQNVT EALQALNKLP
AEKEIGKVKT IGQELRGQIV GVKQELTGNL ESMQRATTAP ILQDAEKMKV RYETLVTDVT
KRVTDFEKIK PANLDSYNKA IADLNNMQQE LTLLRNEKIR MHTDKDKAVD FSDIEALEKR
LQDVQSKLPT QLLEQTSKDV AKLAKMPEKI TFNDIKSMTS KMNNYLETLE LIRNDRIKKH
AGSTDPLDMS DLDELKGQLQ TYNQSMADIL LRAAKSSLDK IKDPATFEKE SPYIKQCFDH
LAELEKTLDD SDKGRKQKED FTAYKSALMD KQEKAYPEML QLQYKSEALI MQLRDICKIH
HDNLAEARRV RLQQLDSQGG GLLGGLWTVT NTIGLTTDTV NIERMQIRMK EQTLRAFKTE
LTNDKLNTDQ VIAFLAKGSP SELQEALGIS KENAEQLHGL LKQLEIKTAS TDKLQEVEKL
IDEVSTKIGK EPVKQDHTIT IDEEESHDVR YDF
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