Gene lpp1535 details

Gene Information

• Locus tag: lpp1535
• Symbol: rpoE
• ID: 3118721
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Legionella pneumophila str. Paris
• Kingdom: Bacteria
• Replicon accession: NC_006368
• Strand: -
• Start bp: 1708617
• End bp: 1709180
• Gene Length: 564 bp
• Protein Length: 187 aa
• Translation table: 11
• GC content: 33%
• IMG OID: 637580230
• Product: sigma factor RpoE (sigma 24)
• Protein accession: YP_123859
• Protein GI: 54297490
• COG category: [K] Transcription
• COG ID: [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
• TIGRFAM ID: [TIGR02937] RNA polymerase sigma factor, sigma-70 family

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCATATTG AGACCTCTTT AAGTGATGAA TCTCTAATTG AATTAGCTCA AAAAGGCAAC 
GGTCTAGCTT TTGATAAACT GTTTGAGCGT TATCAGGGCA AAATTAGACA AATGATTTAT 
TTTTACACGC ATGACTGGAC AAATGTCAAT GATTTAACGC AGGAAGTTCT TATCAAAGTA 
TTTAGGCATT TACCTTATTT TAATGAACGC AGTCAGTTTT CAACCTGGCT ATATAAAATT 
ACTCAAAATA CTATTAAAAA TTATTTTCGC ACCAATAATT TATATACTGA TTCAGAAATG 
CAGTATATGG ATGAACAATT TTCTACACCA CATAATTCTC CAGAGTCAGA CATAATGGGA 
TTAGAGTTTG AGAAACAAAT AGAAGCAGCA ATGTCATGTT TATCTGAAGA GTTACGATTA 
TGTTATGGGC TGCACATATT TGATGGACAA ACTTATCAGG ATATTGCAAA AGAAATGCAT 
TGCCCCATCG GAACTGTACG CTCACGTATA TTTAGAGCTC GAAAACAGCT GATGGATATT 
GTAAGTGAGA ATCACACTTT ATAA 

 

Protein sequence

MHIETSLSDE SLIELAQKGN GLAFDKLFER YQGKIRQMIY FYTHDWTNVN DLTQEVLIKV 
FRHLPYFNER SQFSTWLYKI TQNTIKNYFR TNNLYTDSEM QYMDEQFSTP HNSPESDIMG 
LEFEKQIEAA MSCLSEELRL CYGLHIFDGQ TYQDIAKEMH CPIGTVRSRI FRARKQLMDI 
VSENHTL