Gene lpp1480 details

Gene Information

• Locus tag: lpp1480
• Symbol: pilC
• ID: 3117780
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Legionella pneumophila str. Paris
• Kingdom: Bacteria
• Replicon accession: NC_006368
• Strand: +
• Start bp: 1652458
• End bp: 1653678
• Gene Length: 1221 bp
• Protein Length: 406 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 637580175
• Product: pilus assembly protein PilC
• Protein accession: YP_123804
• Protein GI: 54297435
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG1459] Type II secretory pathway, component PulF

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATAAAA ATAGCCCACC CCTATTAACC TTTCATTATC AAGGCATTAA TAAAGCCGGT 
CAAAAAATGG AGGGTGATAT TCAAGCCAGA AGTTTGGCAA TAGCTAAAGC TGATTTGCGT 
AAGCAGGGGA TTGTTACCAA TAAAGTAGTA AAAAAAAGAA AACCTTTGTT TGATAGAAAA 
AATAAAAAAA TCACACAAGC AGATATTACA GTGTTTAGCC GTCAATTAGC GACGATGATC 
GAGTCTGGAA TACCATTAGT GCAAGCGTTT GATATTGTTG CCAAAGGACA AAGCAATAAA 
AGACTTAAAG ACTTAATAGA AACAATTAAG CACGATATCG AAACGGGGCT AACGCTAGCA 
GAATCCTTAA TTAAACATCC ACTCTATTTT AATGAATTAT TTTGTAATCT TGTCGATGCA 
GGCGAAAAAT CAGGCTCATT AGATATCATG CTTGACAAGG TTGCAACGTA TAAAGAAAAA 
ATTGAAATCA TAAAAAAGAA AATAAAAAAA GCTCTCACTT ACCCAATTGC TGTTATGGTT 
GTCGCACTTT TGGTTACTGC AGGATTATTA ATCTATGTAG TTCCTCAATT TGAATCGTTG 
TTTAAAGGAT TTGGAGCTGA TTTGCCAGCG ATGACTAGAG CTGTGATCAC TATGTCTGAA 
TTTATGCAGG CTTATTGGTA TATTATTTTT GGAGCTTTGG GTGGGGTTGT CTATAGCTTT 
TTTTATGCTA AAAATCATTC TTTGGAGTTT GCACAAACCA TTGACAGAGT GATGCTAAAA 
CTCCCTGTAA TTGGCCCTAT TTTAGAGAAA GCAGCAATTG CTCGATTCGC GAGGACATTA 
TCCATTACTT TTGCTGCTGG ATTACCCCTG GTTGAAGCAT TGAAATCTGT AGCTGGAGCG 
ACTGGGAATA TTATTTATGC CAAGGCGACT GATAAAATCA GAGAAGAAGT TGCAACAGGA 
CAGCAAATGT TTATTGCTAT GGAAAACACT CATTTATTTC CGAATATGGT AATTCAAATG 
GTAGCAATTG GTGAGGAATC AGGTGCCCTT GAAAAAATGT TAAGCAAAGT AGCTGATTTT 
TATGAGGAAG AAGTAAATAA TGCTGTAGAT GCCCTAAGTA GTTTATTGGA GCCGATAATT 
ATGTCAATAT TGGGTATACT GGTTGGGGGA TTGGTGGTGG CTATGTATTT ACCTATTTTC 
AAACTGGGTT CTGCTGTTTA A 

 

Protein sequence

MDKNSPPLLT FHYQGINKAG QKMEGDIQAR SLAIAKADLR KQGIVTNKVV KKRKPLFDRK 
NKKITQADIT VFSRQLATMI ESGIPLVQAF DIVAKGQSNK RLKDLIETIK HDIETGLTLA 
ESLIKHPLYF NELFCNLVDA GEKSGSLDIM LDKVATYKEK IEIIKKKIKK ALTYPIAVMV 
VALLVTAGLL IYVVPQFESL FKGFGADLPA MTRAVITMSE FMQAYWYIIF GALGGVVYSF 
FYAKNHSLEF AQTIDRVMLK LPVIGPILEK AAIARFARTL SITFAAGLPL VEALKSVAGA 
TGNIIYAKAT DKIREEVATG QQMFIAMENT HLFPNMVIQM VAIGEESGAL EKMLSKVADF 
YEEEVNNAVD ALSSLLEPII MSILGILVGG LVVAMYLPIF KLGSAV