Gene lpp1479 details

Gene Information

• Locus tag: lpp1479
• Symbol: pilB
• ID: 3117641
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Legionella pneumophila str. Paris
• Kingdom: Bacteria
• Replicon accession: NC_006368
• Strand: +
• Start bp: 1650728
• End bp: 1652452
• Gene Length: 1725 bp
• Protein Length: 574 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 637580174
• Product: pilus assembly protein PilB
• Protein accession: YP_123803
• Protein GI: 54297434
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB
• TIGRFAM ID: [TIGR02538] type IV-A pilus assembly ATPase PilB

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTCTAG CTACAGAAGA ATATAGATTA CAGGGAATCG GCCAGCTTCT CGTGCTGGAA 
AAGCTGCTAG ACAAAACAAA AGCAATTGAA CTACACAAGT TGGCAGCAGC AGAAAAGATA 
TCTTTGCTGC AATACATTGT AAAAAATAAA ATATTATCTG CTGAACAAAT TGCACTGACG 
GCTGCTCAAA ATTTTGGCGT GCCCATGCTG GATATTAATT GCATCGATGT GGGCGCTATT 
CCTGTCAATC TCGTTAATGA GAAATTAATT AAACGCCACG CCATGGTACC TCTTTTTAGT 
CGCGGCACCA ATTTATATCT CGCAACAGAT GATCCTAGTA AACAAGCTTC ATTAAAGGAA 
ATTCAATTTC ATACCGGATT AAATACTCAT GCGATAGTTG TGGAAGCAGA TAAGCTTAGT 
GCTCTGATTG AAAACCTGTT AACAGCAAAG GAAAGTCAGG GCTTATCAGA GTATGTTGAA 
GACTCTGGAG ATCTGGAAGG TTTGGAAATA AGTGCTGATG ATGAAGATCA AGATATTGAT 
ACTGCAACAT CAGTAACTGA TGATGCCCCT ATCGTAAAAT TCGTCAATAA AATTTTATTG 
GATGCGATAA GGCAAGGAGC TTCTGATATA CACTTTGAGC CTTATGAACG AGAATACCGA 
ATCAGGTACA GGCAAGATGG TATTTTACAT GAGGTCGCTA CCCCCCCGGC AAGCTTGTCA 
TCTCGTATTA CAGCACGCAT CAAGGTAATG TCTAATTTGG ATATATCAGA ACGGCGTATC 
CCCCAGGATG GTGGCTTCAA AATGAAAATT TCCAAGTCAC GAGCAATTGA TTTCAGAGTG 
AGTACATGTC CAACTTCGGC TGGGGAAAAA GTGGTTATGC GGGTTCTTGA TTCTGGTGCT 
GCTAAATTAG GTATTGAAGC ATTAGGATTT AATCCTGTTC AGCGAACAAA TTTCCTGAAA 
GCAATCCAGC GCCCACAAGG GATGATTTTA GTCACTGGCC CTACTGGTAG CGGTAAAACA 
GTCACTTTAT ATACGGCTTT AAATATATTA AATACAATTG AGGTTAATAT TTCAACAGCT 
GAAGATCCAG TTGAAATCAA AGTGCCTGGT ATCAATCAGG TTAATATTAA TCCTAAAGCT 
GGCCTAACCT TTTCCGGTGC ATTGCGTTCG TTTCTAAGGC AAGATCCTGA TATTATCATG 
GTTGGTGAGA TACGTGATCT TGAAACAGCA GAGATTGCTA TAAAAGCTGC TCAGACAGGG 
CATTTGGTTC TTTCTACTCT GCACACAAAC AGTGCCGCTG AAACTTTAAA TCGTTTAGTA 
AACATGGGAA TACCTACTTT TAACATCGCG AGTTCGGTTA CCTTAATTAT TGCGCAAAGG 
CTGGCAAGAA AATTATGCAA TCAATGTAAG GCAGTGCGTG ATGACTTTAC CAATCAAGGC 
TTGATTGAAC TAGGTTTCAA GGAAGCTGAT TTGGTTAATC TTAAATTATA CAAAGCAGTT 
GGTTGTGAGC AATGTACAAG TGGTTATCGC GGGCGAGTTG GGTTGTTTGA GGTTTTACCG 
ATGACGAAAG AGCTTGGCCA ATTGATTATG TCAGGTGGTA ATTCGCTGGA TATATTAAAG 
TTAGCTCAAT CAGAAGGTAT GCTGACTATC TTTCAATCGG GTATAGAAAA AGTTAAGGAA 
GGAATCACGA CCATAGAGGA GGTCAATCGG GTAACCGTTG ATTAA 

 

Protein sequence

MALATEEYRL QGIGQLLVLE KLLDKTKAIE LHKLAAAEKI SLLQYIVKNK ILSAEQIALT 
AAQNFGVPML DINCIDVGAI PVNLVNEKLI KRHAMVPLFS RGTNLYLATD DPSKQASLKE 
IQFHTGLNTH AIVVEADKLS ALIENLLTAK ESQGLSEYVE DSGDLEGLEI SADDEDQDID 
TATSVTDDAP IVKFVNKILL DAIRQGASDI HFEPYEREYR IRYRQDGILH EVATPPASLS 
SRITARIKVM SNLDISERRI PQDGGFKMKI SKSRAIDFRV STCPTSAGEK VVMRVLDSGA 
AKLGIEALGF NPVQRTNFLK AIQRPQGMIL VTGPTGSGKT VTLYTALNIL NTIEVNISTA 
EDPVEIKVPG INQVNINPKA GLTFSGALRS FLRQDPDIIM VGEIRDLETA EIAIKAAQTG 
HLVLSTLHTN SAAETLNRLV NMGIPTFNIA SSVTLIIAQR LARKLCNQCK AVRDDFTNQG 
LIELGFKEAD LVNLKLYKAV GCEQCTSGYR GRVGLFEVLP MTKELGQLIM SGGNSLDILK 
LAQSEGMLTI FQSGIEKVKE GITTIEEVNR VTVD