Gene lpp1315 details

Gene Information

• Locus tag: lpp1315
• Symbol: lspH
• ID: 3117235
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Legionella pneumophila str. Paris
• Kingdom: Bacteria
• Replicon accession: NC_006368
• Strand: -
• Start bp: 1468695
• End bp: 1469180
• Gene Length: 486 bp
• Protein Length: 161 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 637580010
• Product: type II secretory pathway protein LspH
• Protein accession: YP_123639
• Protein GI: 54297270
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG4970] Tfp pilus assembly protein FimT
• TIGRFAM ID: [TIGR01708] general secretion pathway protein H; [TIGR02532] prepilin-type N-terminal cleavage/methylation domain

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCACTC ATAAGGGTTT TACCCTGATA GAAATTCTTA TTGTCATAGT GATTATAGGT 
ATAACCTTGG GGTTTGCCTT AATCGCTTTT GGTGACTTCG GGGAAAGCAG ACGTATACAA 
TTTTCAGCTG AACAATTGGC AAATACCCTA AGCCTGGCTC AACAACAAGC CATTTTAGAA 
AGCAGCACCC TTGGGTTAAA AATAGATAAT ACTAGTTACC AAATTCTGAA ATTTCAGGAT 
CAGGCGGGAT GGAATCCCAT ATCGAACAAA GGAATTTTTA AACTCTACTA TTTTCCCAAA 
AACGTTGTGA TTAGCCTTAA AACAAATCAA AAACATACCC GGGGGAACCC TGCAATCATA 
ATAGCACCAT CTGGTGACAT GACCCCTTTT ACTATAGAAT TTGGCACAGA TAAGGAAAAA 
TGGATAGCCA AACTTACAGG CAGCCATAAT GGTGATTTGG ATTATACCAT GGCAAAATCT 
CAATGA 

 

Protein sequence

MTTHKGFTLI EILIVIVIIG ITLGFALIAF GDFGESRRIQ FSAEQLANTL SLAQQQAILE 
SSTLGLKIDN TSYQILKFQD QAGWNPISNK GIFKLYYFPK NVVISLKTNQ KHTRGNPAII 
IAPSGDMTPF TIEFGTDKEK WIAKLTGSHN GDLDYTMAKS Q