Gene lpp1285 details

Gene Information

• Locus tag: lpp1285
• Symbol: htrA
• ID: 3117617
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Legionella pneumophila str. Paris
• Kingdom: Bacteria
• Replicon accession: NC_006368
• Strand: -
• Start bp: 1430577
• End bp: 1432044
• Gene Length: 1468 bp
• Protein Length: 466 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 637579980
• Product: periplasmic serine protease Do; heat shock protein HtrA
• Protein accession: YP_123609
• Protein GI: 54297240
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
• TIGRFAM ID: [TIGR02037] periplasmic serine protease, Do/DeqQ family

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTAAAA TCAGGATTAA TAATATGATT ACACGTATAA AATTATTCAT AGCAAGTCTG 
CTGGTATTTT TCATCCCGGT AGCCGATGCA GCACAAGATC TTACAAACAT GCCCAGCCTG 
GCTCCTGTTC TGAAAAATGC TATGCCGGCT ATTGTTAACG TGGCTGTTCA AGGCTACTTA 
CCTAATAATA TGGCATCCGG AAATGCGGAC GATGATGACG GGGAAAACAG TAAACAGCCT 
TCCAGAATAC CTGAAAAAGG CAGAAAATTT GAAAGTATAG GGTCCGGAGT TATCATTGAC 
CCTAAAAATG GCATTATTAT AACGAATGAC CATGTTATTC GTAACGCCAA TTTAATTACT 
ATAACTCTTC AAGATGGCAG GAGATTAAAA GCTCGCCTGA TTGGAGGTGA TAGTGAAACA 
GACTTGGCTG TTTTAAAAAT TGATGCTAAA AATTTGAAAT CCCTGGTAAT TGGTGATTCC 
GATAAGCTGG AAGTCGGAGA TTATGTTGTT GCTATTGGAA ACCCCTTTGG ATTAAACAGC 
TTTGGAAATA GTCAATCTGC TACGTTTGGA ATAGTGAGTG CCTTAAAACG CAGCGATTTA 
AATATTGAAG GTGTTGAAAA CTTTATTCAA ACTGACGCAG CTATCAATCC TGGTAATTCA 
GGAGGTGCTT TGGTCAATGC AAAAGGCGAA TTAATTGGCA TTAATACAGC CATTATTTCA 
CCCTATGGAG GAAATGTAGG TATTGGTTTT GCGATCCCAA TTAATATGGT AAAAGATGTA 
GCGCAGCAAA TCATTAAATT TGGCTCTATT CATCGTGGTT TAATGGGTAT ATTTGTTCAA 
CATTTAACAC CAGAACTTGC CCAATCAATG GGATATGCCG AAGATTTTCA AGGAGCTTTA 
GTATCACAGG TCAATGAAAA TTCACCTGCT CAATTGGCTG GTCTAAAATC AGGCGATGTC 
ATTGTACAAA TTAATGACAC CAAGATAACT CAGGCAACAC AGGTAAAAAC AACTATTAGC 
CTGTTGCGAG CCGGCTCTAC TGCTAAAATT AAAATCTTGC GGGATAATAA GCCGCTTACA 
TTAGATGTAG AAGTCACAGA TATCAAAAAA CATGAACAAA AATTACAATC CAATAATCCA 
TTTCTCTACG GATTAGCCTT ACGTAATTTT GAACAAGAAT CACCGCCTCA TGGTAATGTT 
GTTGGAGTTC AGGTTGTAGG TGCTTCGGAA ACCAGTGCGG GCTGGCGAGC TGGCTTAAGA 
CCAGGAGATA TAATCATTTC TGCTAATAAA ACACCGGTTA AAGACATTAA ATCTTTACAA 
GCTGTTGCAC ACGACAAAAA GAAACAGCTA TTAGTCCAGG TGCTGAGAGG AGCAGGAGCA 
CTCTACCTGT TGATTATTTA AATTTTTTAT CCAAATAATG AAGTAAAGCA TCCTCTTTAT 
TTAAGCCCAT CTCTGAGAGA TGGGCTTA 

 

Protein sequence

MSKIRINNMI TRIKLFIASL LVFFIPVADA AQDLTNMPSL APVLKNAMPA IVNVAVQGYL 
PNNMASGNAD DDDGENSKQP SRIPEKGRKF ESIGSGVIID PKNGIIITND HVIRNANLIT 
ITLQDGRRLK ARLIGGDSET DLAVLKIDAK NLKSLVIGDS DKLEVGDYVV AIGNPFGLNS 
FGNSQSATFG IVSALKRSDL NIEGVENFIQ TDAAINPGNS GGALVNAKGE LIGINTAIIS 
PYGGNVGIGF AIPINMVKDV AQQIIKFGSI HRGLMGIFVQ HLTPELAQSM GYAEDFQGAL 
VSQVNENSPA QLAGLKSGDV IVQINDTKIT QATQVKTTIS LLRAGSTAKI KILRDNKPLT 
LDVEVTDIKK HEQKLQSNNP FLYGLALRNF EQESPPHGNV VGVQVVGASE TSAGWRAGLR 
PGDIIISANK TPVKDIKSLQ AVAHDKKKQL LVQVLRGAGA LYLLII