| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | lpp1275 |
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| Symbol | lspD |
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| ID | 3117546 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Legionella pneumophila str. Paris |
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| Kingdom | Bacteria |
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| Replicon accession | NC_006368 |
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| Strand | - |
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| Start bp | 1414427 |
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| End bp | 1416802 |
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| Gene Length | 2376 bp |
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| Protein Length | 791 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637579969 |
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| Product | type II protein secretion LspD |
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| Protein accession | YP_123599 |
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| Protein GI | 54297230 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1450] Type II secretory pathway, component PulD |
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| TIGRFAM ID | [TIGR02517] general secretion pathway protein D |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCTCGA TAGTAATTAT ACTTTTAGCC TTCGTTTGTT GTTCATTAGT ACGTGCTAAT
GATGTCAATA TTTCAACCGT AACCAAAGAT GGCAATACAT TTTTTTATCT TCAAGCTGGC
GCCTATAATC TCGAAAAAGA CGCTAAAATA CGCCAAAATG AACTTGCCAA ATTAGTCGAT
CAAAAAGTTG AAATTAAAAA CCTGGCTGAC AAACATCTTT ACCTTGTGCA GATTGGTCCA
ATTGATGATT ACCAAACTGC AAGAGCACTC AAAGAAAAGT TATCGCAAAA AACAGAAAAA
CAGTTTAATC AAATTAATAA AAACCAAACC TCTTCACTTG AGGTAAGTCA ATTGCCTAAA
AATATGGAAC AAGCGCAAAC GGCTCCTCCA GGCAGTAAAT TATGGAATTT ACGTAACGCT
GATATTAGAG CCGTAATCGC AGAAGTCTCT CGAATTACAG GTAAAAATTT TGTTATTGAC
CCCAGAGTAC AAGGAAAAGT ATCGATTGTT TCATCAACGC CGTTATCCAG CCGCGAGCTA
TATCAAGTCT TTCTCTCAGT ACTGCAGGTA TCAGGTTATG CCGCAATACC TAACGGAGAA
ATTATCAAAA TTATTCCCAA TATTGATGCA AAAACACAGT CACCTGATTT ACTCAGTGGA
ATGAAGAGTC CTCCACGAGG TGACGATATG ATGGTCGCTG TAATACCCGT TCATTATGTT
CCTTCTGAAC AGCTGGTACC TGTTCTAAGG CCACTAATGC CCCAATGGAG CAGCGTATCT
GCCTATGCTC CTTCTAATAT GTTGATCCTG TCTGGTCGAG CAAACAATAT TAAAAGCCTT
GCGGAAATTA TCAAACAAGT AGATAGCTCA AGTGCAAACG GCATAGACAT GGTTCGTTTA
CATCATGCTT TGGCTATGGA TGTTGCAAAC ACTTTAAAAG ACCTGGTTAA AACTCAACCT
GGTATCGGCA GCAGAACACA AATTACCATT GCTGCAGATG ACCGTTCCAA CTCAATTTTA
GTCAGTGGGA GCAAGACGGA TAGAATTCGT TTGCGAATGC TGATATTGAA ACTGGATAAA
GACAGCTCAA CAGGAGTCAA TTCAAATACA CAAGTTGTTT ACCTGAATTA TTTAAGAGCT
GAAGATTTAG TCCCTATACT GGCAGGTATA GCCCAAGCCA ATTTCAGTGG AAATGTAGGA
ACAACCATTG GAACCATTAC AAGACCCGCA TTAGACAGCA CCAACCCTGC TTCCAGTCTC
GCCAATACAT CTGCCGATGG GCAAAGCTCT TCATTAAGCT CCACTTCGAC CAGTTCTGCC
CCTATGAATG CGTCAGGAGC AACAGCAAAT ACGACATCAG CAAGTACTCA AAATGAAGGC
TCTACCAAGC CTACTGTACA GATAATAGGA GAACCGAACA CTAACTCTAT TATTCTTAAT
GCACCTGCTT CAATTATTCG CATTCTAAAA ACAGTCATTT CTCAGCTAGA TATAAAACCA
GCTCAACTAT TAATTGAGGC CCTCGTTGCT GAAGTGGATG AAAAGGACGT TAACAATCTG
GGAATAGAGT GGGGTTCAAA TCAACAAACA GGCAATCCCA AGGATTTCAG ACCAGGCTTT
GCCATTATAA ACAGTAAAAC CAGGATTGAC GATTTCCAAG CTCAAATTTA CGCCTTGGCA
AGAGAGCAAA GAGCAAATAT TTTATCAACT CCCTCCGTAG TAGTCCTTGA TAATCGTCAA
GCAAAAATAC TCATAGGTAA ACAGGTCTCA ATAGCAACAA CCAGCTACCC CAATAATGCA
GGAGGCACTA CCACAGCGAG TCCTTTCACA ACATTTGACA GGGTTAACGT TGCTTTGCAC
CTTTATGTAA GGCCGCAAAT TACTCGCGGA CAAGGAATTC AACTACAGAT TGATCAAGGA
AATGATACTT TGGATCCAGC GACTGCTACA ACAGACAACA CAACAACCCC CACTTTTAAT
ATAAGCAGTA TTGTAACTTC AGTTCATGTA GAAAGTGGTG ATATTGTAGT ACTTGGAGGG
TTGATTCAGG ACAGTATTGG AAATGATAAT AATAAATTAC CCATTTTAGG AGATATCCCT
GGAATAGGCA GATTGTTTCA ACGTAACATT CGCAACAGAG ACAAGCGAGT GCTTATGGTA
TTTATTAAAC CTATCATATT ACGCAACGAA AGAGATAACT TGCATGTCAC AGGCGAAAAA
TACAATTATG TCCGTCAATA TCAGCTGGAT TGGATTCGCT CCCAAGAGGC TTTTGAACAA
ACAGATGATG AAACAGTGTT ACCCCCATTA ACTCAGGGCA ATCTCCCAGT ACCTTTTAGT
ACTCCTCCCC AATACTCATC AAAAATGACC AAATAA
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| Protein sequence | MRSIVIILLA FVCCSLVRAN DVNISTVTKD GNTFFYLQAG AYNLEKDAKI RQNELAKLVD
QKVEIKNLAD KHLYLVQIGP IDDYQTARAL KEKLSQKTEK QFNQINKNQT SSLEVSQLPK
NMEQAQTAPP GSKLWNLRNA DIRAVIAEVS RITGKNFVID PRVQGKVSIV SSTPLSSREL
YQVFLSVLQV SGYAAIPNGE IIKIIPNIDA KTQSPDLLSG MKSPPRGDDM MVAVIPVHYV
PSEQLVPVLR PLMPQWSSVS AYAPSNMLIL SGRANNIKSL AEIIKQVDSS SANGIDMVRL
HHALAMDVAN TLKDLVKTQP GIGSRTQITI AADDRSNSIL VSGSKTDRIR LRMLILKLDK
DSSTGVNSNT QVVYLNYLRA EDLVPILAGI AQANFSGNVG TTIGTITRPA LDSTNPASSL
ANTSADGQSS SLSSTSTSSA PMNASGATAN TTSASTQNEG STKPTVQIIG EPNTNSIILN
APASIIRILK TVISQLDIKP AQLLIEALVA EVDEKDVNNL GIEWGSNQQT GNPKDFRPGF
AIINSKTRID DFQAQIYALA REQRANILST PSVVVLDNRQ AKILIGKQVS IATTSYPNNA
GGTTTASPFT TFDRVNVALH LYVRPQITRG QGIQLQIDQG NDTLDPATAT TDNTTTPTFN
ISSIVTSVHV ESGDIVVLGG LIQDSIGNDN NKLPILGDIP GIGRLFQRNI RNRDKRVLMV
FIKPIILRNE RDNLHVTGEK YNYVRQYQLD WIRSQEAFEQ TDDETVLPPL TQGNLPVPFS
TPPQYSSKMT K
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