Gene lpp1180 details

Gene Information

• Locus tag: lpp1180
• Symbol: ribD
• ID: 3117622
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Legionella pneumophila str. Paris
• Kingdom: Bacteria
• Replicon accession: NC_006368
• Strand: +
• Start bp: 1315896
• End bp: 1316982
• Gene Length: 1087 bp
• Protein Length: 357 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 637579872
• Product: riboflavin biosynthesis protein RibD
• Protein accession: YP_123504
• Protein GI: 54297135
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0117] Pyrimidine deaminase; [COG1985] Pyrimidine reductase, riboflavin biosynthesis
• TIGRFAM ID: [TIGR00227] riboflavin-specific deaminase C-terminal domain; [TIGR00326] riboflavin biosynthesis protein RibD

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

AGGTGGTTAA TATATGCACG AACAGTTTCT GCTTGCAGCA CTTGAACAAG CCAAACTGGG 
GAGAGGCTTT TGTGCCCCCA ATCCCAGCGT TGGGGCGGTT GCTGTGCAAA ATGGTAATAT 
TATAGCACAG GCATGGCATA GAGGTGCAGG TACACCGCAT GCAGAACAAT TATTGTTATC 
ACAAATTCCA CCCCAAACGC CAGGGGTTAC GCTTTATGTC ACACTGGAGC CTTGTAATCA 
TTGGGGTAAA ACTCCCCCTT GTGTTGATGC TATTATCAAT CATGGTATAC AGGAGGTTGT 
TTTTTCCTAT TTTGACCCAA ACCCCATTGT TGCCAAAAGT AACTCCTCAG AAAAATTACG 
TGAACATGGA ATACAAGTCA GGCATATTCC TATAAAGGCA ATTGATGCGT TCTATAAAAG 
CTATGCTTAT TGGACTATGA CCCATAAACC AAGAGTCACT GTTAAAATAG CACAAACTTT 
TGATGGTAAA ATTGGAAAGT CTGAGGGAGA TCGAGTGGTT TTGTCCAATG TTTTATGCGA 
ACAGTTCACT CATCAAATGC GCGCTGCCAG TGACGTCATA TTAACCAGTG CCAAGACAGT 
TCAAATGGAT AATCCAAGAA TGAACGCCAG ATTAGATAGT GGAGTGGTAG CAAAGCCAGT 
TGCCATTGTT GACCGCAATT TAAGTTTGTC TGATGACACA ATCATTTTTT CGACAGCAAA 
ACATTGCCAC ATTTATCATC AACCACAAGC AAATCAGGCC AAGACTTATC CTAATAGCAC 
TCATTATGCG ATGCCTTTGC AAAATGGGTT GATGGACTTG GATGCAATAA TAACTCATCT 
TGGTCAACTG GGATATCATG ACGTATGGGT TGAAGCGGGC GGAGCTATTT TTTCTGCGTT 
ACATAGCAAG GGATTGGTGC ATAGAACCTA TTTGTATTTA GTTCCGGGCA GTTTAGGGCA 
TCAAGCGATT TCAGCTTATC AACAACAGGG GATTTTTGAA AAAGCTCATA CGGTGAGTTG 
GCAAGCTATG GGTGACAATA TGATAGCATG TTTGGATTGG CAGGAGGATG AGTGTTTACC 
GGATTGA 

 

Protein sequence

MHEQFLLAAL EQAKLGRGFC APNPSVGAVA VQNGNIIAQA WHRGAGTPHA EQLLLSQIPP 
QTPGVTLYVT LEPCNHWGKT PPCVDAIINH GIQEVVFSYF DPNPIVAKSN SSEKLREHGI 
QVRHIPIKAI DAFYKSYAYW TMTHKPRVTV KIAQTFDGKI GKSEGDRVVL SNVLCEQFTH 
QMRAASDVIL TSAKTVQMDN PRMNARLDSG VVAKPVAIVD RNLSLSDDTI IFSTAKHCHI 
YHQPQANQAK TYPNSTHYAM PLQNGLMDLD AIITHLGQLG YHDVWVEAGG AIFSALHSKG 
LVHRTYLYLV PGSLGHQAIS AYQQQGIFEK AHTVSWQAMG DNMIACLDWQ EDECLPD