Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | lpp1024 |
Symbol | dnaE |
ID | 3118295 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Legionella pneumophila str. Paris |
Kingdom | Bacteria |
Replicon accession | NC_006368 |
Strand | + |
Start bp | 1143240 |
End bp | 1146686 |
Gene Length | 3447 bp |
Protein Length | 1148 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637579719 |
Product | DNA polymerase III, alpha chain |
Protein accession | YP_123352 |
Protein GI | 54296983 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0587] DNA polymerase III, alpha subunit |
TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGACAAC GATTTGTTCA TTTAAGAGTA CATACGGAAT TTTCATTAGT TGATGGTTTG GTACAGATTA AGCCATTGAT GAAAGCTTTG CCAGCCAGAG GTATGAGCAC AGTTGCTGTA ACGGATTTTT GTAATTTATT CGCTGCTGTC AAAGTATTTA AAAGTGCGAC AGAGGCGGGA ATCAAACCCA TTATTGGTAG TGATTTGCCA TGCCATGATT TGGAAACCCC GGATAACATT TTTTCTTTGG TTTTATTATG TCAAGACACA GCAGGTTATA AAAATTTAAC CTGTCTGGTA TCCAAAGCAT ATCAAGAAGG GCAATATCAT GGCCAACCCA GGGTGCAATT ACAATGGATT CCAGAATTTT CACAGGGATT AATCGCATTA TCTGGAGGAA AGTTCGGTGA CATTGGGCAA GCATTGCTGG CAAATGATGA CACCTTGGCA AGAAAACGTG CTTTGCATTG GATGAATTTA TTTCCGAATC GGTTTTATCT GGAAATTCAG CGAACCGGAA GAGCTGATGA GCTGCATTAT AATGAGAAGC TGGTCGCGTT AGCAGATGAG TTGCAATTAC CCCTAGTTGC AACCAACGAT GTAAGGTTCA TCAATGAGGA TGATTTTGAC GCTCATGAAG CTCGTGTATG CATTCACGAA GGGTACACTT TGGCTGATCC CAGGAGAGTT CAACAATACA GCTCCCAACA GTATCTGCGC TCAGCAGATG AAATGGAGCT CTTATTTTCG GATCTTCCCA GTGCATTACA AAACACAGTC GAAATTAGTA AACGCTGTAA TGTAAAACTC GAGCTGGGCC ATAACTATCT ACCTAATTTC CCTATACCGG ATGGAACAAC AGTAGAGGCG TATTTATCAC ATCTTTCTGA AATTGGCTTG GAGGAACGTT TAAAGCAATT ATTCAGAGAT AAGTCTGAGG GGGAACTGCT TGTTGCCAGA GGAGAGTACG ACAAACGCCT TAAAATTGAA CTGGATGTTA TTAATAACAT GGGCTTTGCT GGCTATTTCC TGATTGTTGC TGATTTTATT CAATGGGCTA AACAAAATGG GGTTCCAGTA GGACCAGGTC GTGGTTCTGG TGCTGGTTCT CTGGTTGCTT ATGCCCTAAA AATAACAGAT CTGGATCCTT TAGAGTATGA GCTGCTTTTT GAACGATTCT TAAACCCCGA ACGTGTTTCT ATGCCTGACT TTGATATTGA TTTTTGCATG GAAGGCCGTG ATCGGGTCAT TGAATATGTA GCAGAGAAAT ATGGCCGGCA GAGCGTTTCC CAAATTATTA CTTTTGGCAC TATGGCCGCA AAGGCTGTGG TGAGAGATGT TGGGCGTGTT TTAGGTCATC CTTATGGCTT TGTGGATAAG CTTGCGAAAT TAATTCCCTT TGAGTTAGGC ATAACTTTAA GTAAAGCGAT GGAGCAGGAA GAAGAGCTTC GCCGACGATA TGAAGAAGAG GAGGAAGTAA AAGAGCTATT TGATCTTGCC CTGAAATTGG AGGGAGTTAC TCGTAATGCA GGCAAGCATG CTGGGGGAGT GGTTATTGCA CCTTCTCAGC TGACTGATTT CACGGCAATA TATTGTGAAG AAGGATCAAC ACAAATAGTT AGCCAATTTG ATAAAGACGA TGTTGAGGCG GTTGGGTTAG TCAAGTTTGA TTTTTTAGGA TTAAGAACAC TAACCATAAT CGATTGGGCC CTGGCCACAG TGAATAAGCA ATGCGAAAAT GCCGGGTTGT CACCAATTGA TATTAGCCAA ATTCCAACGA GTGATGACTC TACTTTTGAG TTATTAAAAG CATGTAAAAC TACTGCTGTA TTTCAGCTGG AATCTCGAGG CATGAAGGAG CTGATTAGCC GGCTTCAACC CGATTGTTTT GAAGACATCA TTGCTTTGGT TGCTTTATTC AGACCAGGTC CTCTACAGTC AGGGATGGTG GATGACTTTA TCGACAGGAA GCATGGCAGG GCTCGAGTTG ATTACCCCCA TCCAGACTTG GAACCAATTC TTAAACCCAC TTATGGGGTT ATCCTCTATC AAGAACAAGT AATGCAAATC GCTCAGGTTC TTGCCAATTA CACGCTTGGC GCTGCTGACT TGTTAAGACG AGCCATGGGG AAGAAAAAAC CGGAAGAAAT GGCAAAGCAA AGGGAAATTT TTACCCAGGG AGCTGTTGCG AGAGGAGTAG ACGAACAGGT AGCAACCCAT ATTTTTGATT TAATGGAGAA GTTCGCCGGA TATGGATTCA ATAAATCACA TTCTGCCGCG TACGCTTTAG TCGCTTATCA AACCGCCTGG CTAAAAGCAC ATTATCCTGC AGCTTTTATG GCTGCGGTGA TGTCCTCTGA TATGGATAAC ACGGATAAGG TTGTAACTTT TATTGATGAA TGCGCGCACA TGAAATTACA AGTGTTGCCT CCTTCTATCA ATAACTCCAT GTATCATTTT ACCGTATCCG ATGAAAAGAC GATTATTTAT GGCCTTGGGG CAATAAAGGG GGTTGGCGAA TCTGCGATTG AGTGTATTAT TCAGGAGAGA AACCAGAATG GACCTTTTTT GGATTTGTTT GGTTTTTGTC AAAGATTGGA TTTACGCAAA GTCAACAGAA GAGTGATTGA AGCTTTAATC AAGAGTGGTG CTTTTGATAT TTGGAAAGTG GAAAGGGCTG TATTAACAGC GTCCTTGGAA AAAGCACTGA AAGTTGCCGA AAAGGAACAT CAAAATCAAT CAAGTGGACA ATTTGATCTA TTCTCCCTTT TAGAGGACAA AGCGGATGAA CAAAATTATG TGGAAAGTAA ATCCTGGTCT GAAGCCCAAA GATTAGAAGG CGAAAGAGAG GTATTAGGTT TTTACCTTAC TGGCCATCCT GCTGACCGAT ACAGACGTGA ATTGGGAGAT TTTATTGTTC CTGTCGGCCA ATTAAATCCG TCTTTACATA AAAAAGCGAT TATTTGCGCT CAGGTTGTAG CAATTAGAAA AATTATCACC AAACGTGGCA AGAAATTGGT GATTATTGGA ATGGATGATG CGACTGCCAG GATTGATGCC GTAGTTTTTG GTGAGATTTT TGATCAATAT TCTGATCCGT TGGCGACGGG TAACATGCTT GTAATTGAGG GTGAGGTTGC AATTGATGAT TACAACGGTG GTATTAAAGT GACCGCCAAT CAGCTTTTAA GTATCGCTTC AGCTCGAACA AAATTCGCTC GTTGTCTGGA GTTGCGTTTA AATCAAAACA ATGCTGCTGT ATTGCCTTCT ATCCAATCCT TACTGAAGAC TTATTCAGGA CGGTGTGCTG TTCAATTGGC TTATGCTAAT GGTGTTGCTA AAGCTAATTT AAATCTTGGC CAACAATGGT GTGTGACCCC TAGCGATGAG TTAATTGGAC TATTGAGCAA TCTTTTAGGG GAAGAACAAG TAATAATGCG TTATTAG
|
Protein sequence | MRQRFVHLRV HTEFSLVDGL VQIKPLMKAL PARGMSTVAV TDFCNLFAAV KVFKSATEAG IKPIIGSDLP CHDLETPDNI FSLVLLCQDT AGYKNLTCLV SKAYQEGQYH GQPRVQLQWI PEFSQGLIAL SGGKFGDIGQ ALLANDDTLA RKRALHWMNL FPNRFYLEIQ RTGRADELHY NEKLVALADE LQLPLVATND VRFINEDDFD AHEARVCIHE GYTLADPRRV QQYSSQQYLR SADEMELLFS DLPSALQNTV EISKRCNVKL ELGHNYLPNF PIPDGTTVEA YLSHLSEIGL EERLKQLFRD KSEGELLVAR GEYDKRLKIE LDVINNMGFA GYFLIVADFI QWAKQNGVPV GPGRGSGAGS LVAYALKITD LDPLEYELLF ERFLNPERVS MPDFDIDFCM EGRDRVIEYV AEKYGRQSVS QIITFGTMAA KAVVRDVGRV LGHPYGFVDK LAKLIPFELG ITLSKAMEQE EELRRRYEEE EEVKELFDLA LKLEGVTRNA GKHAGGVVIA PSQLTDFTAI YCEEGSTQIV SQFDKDDVEA VGLVKFDFLG LRTLTIIDWA LATVNKQCEN AGLSPIDISQ IPTSDDSTFE LLKACKTTAV FQLESRGMKE LISRLQPDCF EDIIALVALF RPGPLQSGMV DDFIDRKHGR ARVDYPHPDL EPILKPTYGV ILYQEQVMQI AQVLANYTLG AADLLRRAMG KKKPEEMAKQ REIFTQGAVA RGVDEQVATH IFDLMEKFAG YGFNKSHSAA YALVAYQTAW LKAHYPAAFM AAVMSSDMDN TDKVVTFIDE CAHMKLQVLP PSINNSMYHF TVSDEKTIIY GLGAIKGVGE SAIECIIQER NQNGPFLDLF GFCQRLDLRK VNRRVIEALI KSGAFDIWKV ERAVLTASLE KALKVAEKEH QNQSSGQFDL FSLLEDKADE QNYVESKSWS EAQRLEGERE VLGFYLTGHP ADRYRRELGD FIVPVGQLNP SLHKKAIICA QVVAIRKIIT KRGKKLVIIG MDDATARIDA VVFGEIFDQY SDPLATGNML VIEGEVAIDD YNGGIKVTAN QLLSIASART KFARCLELRL NQNNAAVLPS IQSLLKTYSG RCAVQLAYAN GVAKANLNLG QQWCVTPSDE LIGLLSNLLG EEQVIMRY
|
| |