Gene lpp1024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus taglpp1024 
SymboldnaE 
ID3118295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLegionella pneumophila str. Paris 
KingdomBacteria 
Replicon accessionNC_006368 
Strand
Start bp1143240 
End bp1146686 
Gene Length3447 bp 
Protein Length1148 aa 
Translation table11 
GC content42% 
IMG OID637579719 
ProductDNA polymerase III, alpha chain 
Protein accessionYP_123352 
Protein GI54296983 
COG category[L] Replication, recombination and repair 
COG ID[COG0587] DNA polymerase III, alpha subunit 
TIGRFAM ID[TIGR00594] DNA-directed DNA polymerase III (polc) 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGACAAC GATTTGTTCA TTTAAGAGTA CATACGGAAT TTTCATTAGT TGATGGTTTG 
GTACAGATTA AGCCATTGAT GAAAGCTTTG CCAGCCAGAG GTATGAGCAC AGTTGCTGTA
ACGGATTTTT GTAATTTATT CGCTGCTGTC AAAGTATTTA AAAGTGCGAC AGAGGCGGGA
ATCAAACCCA TTATTGGTAG TGATTTGCCA TGCCATGATT TGGAAACCCC GGATAACATT
TTTTCTTTGG TTTTATTATG TCAAGACACA GCAGGTTATA AAAATTTAAC CTGTCTGGTA
TCCAAAGCAT ATCAAGAAGG GCAATATCAT GGCCAACCCA GGGTGCAATT ACAATGGATT
CCAGAATTTT CACAGGGATT AATCGCATTA TCTGGAGGAA AGTTCGGTGA CATTGGGCAA
GCATTGCTGG CAAATGATGA CACCTTGGCA AGAAAACGTG CTTTGCATTG GATGAATTTA
TTTCCGAATC GGTTTTATCT GGAAATTCAG CGAACCGGAA GAGCTGATGA GCTGCATTAT
AATGAGAAGC TGGTCGCGTT AGCAGATGAG TTGCAATTAC CCCTAGTTGC AACCAACGAT
GTAAGGTTCA TCAATGAGGA TGATTTTGAC GCTCATGAAG CTCGTGTATG CATTCACGAA
GGGTACACTT TGGCTGATCC CAGGAGAGTT CAACAATACA GCTCCCAACA GTATCTGCGC
TCAGCAGATG AAATGGAGCT CTTATTTTCG GATCTTCCCA GTGCATTACA AAACACAGTC
GAAATTAGTA AACGCTGTAA TGTAAAACTC GAGCTGGGCC ATAACTATCT ACCTAATTTC
CCTATACCGG ATGGAACAAC AGTAGAGGCG TATTTATCAC ATCTTTCTGA AATTGGCTTG
GAGGAACGTT TAAAGCAATT ATTCAGAGAT AAGTCTGAGG GGGAACTGCT TGTTGCCAGA
GGAGAGTACG ACAAACGCCT TAAAATTGAA CTGGATGTTA TTAATAACAT GGGCTTTGCT
GGCTATTTCC TGATTGTTGC TGATTTTATT CAATGGGCTA AACAAAATGG GGTTCCAGTA
GGACCAGGTC GTGGTTCTGG TGCTGGTTCT CTGGTTGCTT ATGCCCTAAA AATAACAGAT
CTGGATCCTT TAGAGTATGA GCTGCTTTTT GAACGATTCT TAAACCCCGA ACGTGTTTCT
ATGCCTGACT TTGATATTGA TTTTTGCATG GAAGGCCGTG ATCGGGTCAT TGAATATGTA
GCAGAGAAAT ATGGCCGGCA GAGCGTTTCC CAAATTATTA CTTTTGGCAC TATGGCCGCA
AAGGCTGTGG TGAGAGATGT TGGGCGTGTT TTAGGTCATC CTTATGGCTT TGTGGATAAG
CTTGCGAAAT TAATTCCCTT TGAGTTAGGC ATAACTTTAA GTAAAGCGAT GGAGCAGGAA
GAAGAGCTTC GCCGACGATA TGAAGAAGAG GAGGAAGTAA AAGAGCTATT TGATCTTGCC
CTGAAATTGG AGGGAGTTAC TCGTAATGCA GGCAAGCATG CTGGGGGAGT GGTTATTGCA
CCTTCTCAGC TGACTGATTT CACGGCAATA TATTGTGAAG AAGGATCAAC ACAAATAGTT
AGCCAATTTG ATAAAGACGA TGTTGAGGCG GTTGGGTTAG TCAAGTTTGA TTTTTTAGGA
TTAAGAACAC TAACCATAAT CGATTGGGCC CTGGCCACAG TGAATAAGCA ATGCGAAAAT
GCCGGGTTGT CACCAATTGA TATTAGCCAA ATTCCAACGA GTGATGACTC TACTTTTGAG
TTATTAAAAG CATGTAAAAC TACTGCTGTA TTTCAGCTGG AATCTCGAGG CATGAAGGAG
CTGATTAGCC GGCTTCAACC CGATTGTTTT GAAGACATCA TTGCTTTGGT TGCTTTATTC
AGACCAGGTC CTCTACAGTC AGGGATGGTG GATGACTTTA TCGACAGGAA GCATGGCAGG
GCTCGAGTTG ATTACCCCCA TCCAGACTTG GAACCAATTC TTAAACCCAC TTATGGGGTT
ATCCTCTATC AAGAACAAGT AATGCAAATC GCTCAGGTTC TTGCCAATTA CACGCTTGGC
GCTGCTGACT TGTTAAGACG AGCCATGGGG AAGAAAAAAC CGGAAGAAAT GGCAAAGCAA
AGGGAAATTT TTACCCAGGG AGCTGTTGCG AGAGGAGTAG ACGAACAGGT AGCAACCCAT
ATTTTTGATT TAATGGAGAA GTTCGCCGGA TATGGATTCA ATAAATCACA TTCTGCCGCG
TACGCTTTAG TCGCTTATCA AACCGCCTGG CTAAAAGCAC ATTATCCTGC AGCTTTTATG
GCTGCGGTGA TGTCCTCTGA TATGGATAAC ACGGATAAGG TTGTAACTTT TATTGATGAA
TGCGCGCACA TGAAATTACA AGTGTTGCCT CCTTCTATCA ATAACTCCAT GTATCATTTT
ACCGTATCCG ATGAAAAGAC GATTATTTAT GGCCTTGGGG CAATAAAGGG GGTTGGCGAA
TCTGCGATTG AGTGTATTAT TCAGGAGAGA AACCAGAATG GACCTTTTTT GGATTTGTTT
GGTTTTTGTC AAAGATTGGA TTTACGCAAA GTCAACAGAA GAGTGATTGA AGCTTTAATC
AAGAGTGGTG CTTTTGATAT TTGGAAAGTG GAAAGGGCTG TATTAACAGC GTCCTTGGAA
AAAGCACTGA AAGTTGCCGA AAAGGAACAT CAAAATCAAT CAAGTGGACA ATTTGATCTA
TTCTCCCTTT TAGAGGACAA AGCGGATGAA CAAAATTATG TGGAAAGTAA ATCCTGGTCT
GAAGCCCAAA GATTAGAAGG CGAAAGAGAG GTATTAGGTT TTTACCTTAC TGGCCATCCT
GCTGACCGAT ACAGACGTGA ATTGGGAGAT TTTATTGTTC CTGTCGGCCA ATTAAATCCG
TCTTTACATA AAAAAGCGAT TATTTGCGCT CAGGTTGTAG CAATTAGAAA AATTATCACC
AAACGTGGCA AGAAATTGGT GATTATTGGA ATGGATGATG CGACTGCCAG GATTGATGCC
GTAGTTTTTG GTGAGATTTT TGATCAATAT TCTGATCCGT TGGCGACGGG TAACATGCTT
GTAATTGAGG GTGAGGTTGC AATTGATGAT TACAACGGTG GTATTAAAGT GACCGCCAAT
CAGCTTTTAA GTATCGCTTC AGCTCGAACA AAATTCGCTC GTTGTCTGGA GTTGCGTTTA
AATCAAAACA ATGCTGCTGT ATTGCCTTCT ATCCAATCCT TACTGAAGAC TTATTCAGGA
CGGTGTGCTG TTCAATTGGC TTATGCTAAT GGTGTTGCTA AAGCTAATTT AAATCTTGGC
CAACAATGGT GTGTGACCCC TAGCGATGAG TTAATTGGAC TATTGAGCAA TCTTTTAGGG
GAAGAACAAG TAATAATGCG TTATTAG
 
Protein sequence
MRQRFVHLRV HTEFSLVDGL VQIKPLMKAL PARGMSTVAV TDFCNLFAAV KVFKSATEAG 
IKPIIGSDLP CHDLETPDNI FSLVLLCQDT AGYKNLTCLV SKAYQEGQYH GQPRVQLQWI
PEFSQGLIAL SGGKFGDIGQ ALLANDDTLA RKRALHWMNL FPNRFYLEIQ RTGRADELHY
NEKLVALADE LQLPLVATND VRFINEDDFD AHEARVCIHE GYTLADPRRV QQYSSQQYLR
SADEMELLFS DLPSALQNTV EISKRCNVKL ELGHNYLPNF PIPDGTTVEA YLSHLSEIGL
EERLKQLFRD KSEGELLVAR GEYDKRLKIE LDVINNMGFA GYFLIVADFI QWAKQNGVPV
GPGRGSGAGS LVAYALKITD LDPLEYELLF ERFLNPERVS MPDFDIDFCM EGRDRVIEYV
AEKYGRQSVS QIITFGTMAA KAVVRDVGRV LGHPYGFVDK LAKLIPFELG ITLSKAMEQE
EELRRRYEEE EEVKELFDLA LKLEGVTRNA GKHAGGVVIA PSQLTDFTAI YCEEGSTQIV
SQFDKDDVEA VGLVKFDFLG LRTLTIIDWA LATVNKQCEN AGLSPIDISQ IPTSDDSTFE
LLKACKTTAV FQLESRGMKE LISRLQPDCF EDIIALVALF RPGPLQSGMV DDFIDRKHGR
ARVDYPHPDL EPILKPTYGV ILYQEQVMQI AQVLANYTLG AADLLRRAMG KKKPEEMAKQ
REIFTQGAVA RGVDEQVATH IFDLMEKFAG YGFNKSHSAA YALVAYQTAW LKAHYPAAFM
AAVMSSDMDN TDKVVTFIDE CAHMKLQVLP PSINNSMYHF TVSDEKTIIY GLGAIKGVGE
SAIECIIQER NQNGPFLDLF GFCQRLDLRK VNRRVIEALI KSGAFDIWKV ERAVLTASLE
KALKVAEKEH QNQSSGQFDL FSLLEDKADE QNYVESKSWS EAQRLEGERE VLGFYLTGHP
ADRYRRELGD FIVPVGQLNP SLHKKAIICA QVVAIRKIIT KRGKKLVIIG MDDATARIDA
VVFGEIFDQY SDPLATGNML VIEGEVAIDD YNGGIKVTAN QLLSIASART KFARCLELRL
NQNNAAVLPS IQSLLKTYSG RCAVQLAYAN GVAKANLNLG QQWCVTPSDE LIGLLSNLLG
EEQVIMRY