Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | lpp1020 |
Symbol | lig |
ID | 3117317 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Legionella pneumophila str. Paris |
Kingdom | Bacteria |
Replicon accession | NC_006368 |
Strand | + |
Start bp | 1136515 |
End bp | 1138536 |
Gene Length | 2022 bp |
Protein Length | 673 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637579715 |
Product | DNA ligase |
Protein accession | YP_123348 |
Protein GI | 54296979 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGATC AAGGAATTAA GGAATCGATA GAAACGCTTA AAGAGCAAAT AAGAAAATAC GATTATCACT ATTATGTTTT AGATGAACCT TTGGTTCCTG ACGCGGAATA TGATCGATGT TTCAAGGCAT TGCAACAGTA TGAAGAGCAA TATCCGCAAT TTTTATCGCC AGATTCCCCT ACACAGAGAG TGAGCGGTAC TCCTTCAGAT GCTTTTATGC CGGTAGCCCA TAAGCAACCC ATGTTGTCTT TATCCAATGT GTTTACTATC GATGAATTAA AAGCATTCAT TAAACGAGCA ATTGAGAAAC TGGATGAACC AAATCAACAA CTGGTATTTG CTTGCGAACC AAAGCTTGAT GGGTTGGCTG TTAACATGAC TTATGAGGGC GGGATCTTGA CTCATGCCGC AACTCGTGGC GATGGTGCTG TAGGAGAAAA CATCACGGCA AATATTAAGA CTATTGCTTC AGTTCCATTA AGGCTAAGGG TTAGTAACCC TCCAAAATTG ATCGAAGTGC GGGGTGAAGT CTATATCCCC AAAGCCGATT TTGAAGCTTA CAACGCAAGG GCTAGAGAAC TCGGTGAAAA AACTTTTGCT AATCCGCGAA ATGCTGCTGC AGGCAGTTTA AGACAATTAA ATCCTGAAAT TTCTGCCAGT CGTCCACTTG CTATTTATTG TTATAGTATA GGGGCTTGCG AGGATTATAA GTTACCTAAC AGTCATTTGG AGCAATTGAA TTTATTAAAA GAGTTTGGAT TTAGAGTGTC TCCAGAAACG AGGAGGGCGA TTGGAGTAGA AGGCTGTTTA GATTATTACC AGTATATGTT AGCGAAACGG AATCAATTGC CATTTGAAAT CGATGGGGTT GTTTATAAGA TTGACAGTAT CTCCTTGCAA CAGCAATTAG GTTATGTTTC TCGTGCCCCA AGATTTGCTT GTGCCCATAA ATTTCCCGCT ACAGAAGAAA TGACTCGTCT GATAGCCGTG GATTTCCAGG TAGGTAGAAC GGGTGCTGTG ACGCCGGTTG CACGTTTGGA GCCAGTTAGT GTTGGTGGTG TTACAGTAAG TAACGCGACT TTGCATAATT TTGATGAAAT TACACGAAAA GACATTCGTA TTGGTGATAC GGTTATTATT CGTCGTGCCG GTGATGTGAT CCCTGAAGTA GTTTCTGTGA TTTTGGAAAA GCGTCCCATT AATGCCAGAA AGATTGAGCT TCCTAAAAAT TGCCCTGTTT GTGGTTCTGA AGTCGTAAGG GAAGCGGATG AAGCAATTGC TCGGTGTATC GGCGGTTTAT ATTGTAAAGC ACAATTAAAA AGGATGATGT GGCATTTTGC TTCTCGAAAA GCGATGTATA TTGAAGGACT TGGTAGTGTT TTAATTGATC AGTTAGTTGA TGAGGGTATT GTCCATCATT TGGCGGATCT TTATGAACTC GATTTGCAGA CTTTAGCTAA CCTGCCAAGG ATGGGGGAGA AATCTGCAAA AAACTTATTA TCCGCTTTGG AAAAAAGTAA AAAAACGACT TTCAATCGCT TTCTTTATGC TTTGGGGATC AGAGAAATCG GTGAAGCTGG CGCAAGGGTT TTAGCGGAGC ACTACTGTGA TGTAGAGAGC TTGAAATCAG CAACGATTGA GGAATTAATG ACTCTGAATG ACATAGGTCC AGTAGCGGCT TCTCATGTAG TCCATTTCTT TGCTCAAGCG CATAATCTTG AAGTGATTGA CCGTCTTCTC GAGTTGGGTA TTCATTGGCC TAAGCCCGAA AAAATACAGG TTAATCAGCA AAATCCATTT TTTGGTAAAA CAGTAGTTTT AACTGGAACT CTGAGTGCCA TGGGGAGGGA AGAGGCAAAG GCAAAATTAT TAGCCTTAGG TGCAAAAGTG AGTGGAAGTG TGTCTTCCAA AACGGATTAT GTAATAGCAG GAAGTGAAGC CGGTTCAAAG CTGATTAAAG CGACAGAACT GGGAGTAGCG ATTATAGAGG AAGACGAGTT TTTAAAATGG GTTAATTCAT GA
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Protein sequence | MNDQGIKESI ETLKEQIRKY DYHYYVLDEP LVPDAEYDRC FKALQQYEEQ YPQFLSPDSP TQRVSGTPSD AFMPVAHKQP MLSLSNVFTI DELKAFIKRA IEKLDEPNQQ LVFACEPKLD GLAVNMTYEG GILTHAATRG DGAVGENITA NIKTIASVPL RLRVSNPPKL IEVRGEVYIP KADFEAYNAR ARELGEKTFA NPRNAAAGSL RQLNPEISAS RPLAIYCYSI GACEDYKLPN SHLEQLNLLK EFGFRVSPET RRAIGVEGCL DYYQYMLAKR NQLPFEIDGV VYKIDSISLQ QQLGYVSRAP RFACAHKFPA TEEMTRLIAV DFQVGRTGAV TPVARLEPVS VGGVTVSNAT LHNFDEITRK DIRIGDTVII RRAGDVIPEV VSVILEKRPI NARKIELPKN CPVCGSEVVR EADEAIARCI GGLYCKAQLK RMMWHFASRK AMYIEGLGSV LIDQLVDEGI VHHLADLYEL DLQTLANLPR MGEKSAKNLL SALEKSKKTT FNRFLYALGI REIGEAGARV LAEHYCDVES LKSATIEELM TLNDIGPVAA SHVVHFFAQA HNLEVIDRLL ELGIHWPKPE KIQVNQQNPF FGKTVVLTGT LSAMGREEAK AKLLALGAKV SGSVSSKTDY VIAGSEAGSK LIKATELGVA IIEEDEFLKW VNS
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