Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | lpp1016 |
Symbol | mfd |
ID | 3118692 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Legionella pneumophila str. Paris |
Kingdom | Bacteria |
Replicon accession | NC_006368 |
Strand | - |
Start bp | 1129415 |
End bp | 1132876 |
Gene Length | 3462 bp |
Protein Length | 1153 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637579711 |
Product | transcription-repair coupling factor |
Protein accession | YP_123344 |
Protein GI | 54296975 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1197] Transcription-repair coupling factor (superfamily II helicase) |
TIGRFAM ID | [TIGR00580] transcription-repair coupling factor (mfd) |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATACAA AAACGCTACT TTACCAACCC ACAAAAAATA AACAAATATG GGGGCAACTC TATGGTAGCA GTCTGGCACT TGCTTTAGCC GAATATTGCC AACAAACACC CGGGATCAAA TTACTTATTA CGCAAGACAA CCTATGCGCC AGTCAGTTGC AGGATGAACT ACAATTTTTT CTAAACCCGA ACCAAAATAC CCAGGAGTTA TTATTTTTTC CCGACTGGGA AACCTTGCCT TATGATCAAT TCTCTCCTCA TCAAGATATT ATTTCAGAAA GACTCTACAC CTTAAGCAGA GTTCAACAAA TTACCAATGG AATCATTATT TCTTCAGCCA GCACTTTAAT GCACAGACTT TCTCCGCCAG AGTTTTTAAA TCAATACGCT TTAATGCTTA AAGAGGGGCA AAAGCTTGAT CTGAACTCGT TCAGGAATCA GTTGCAACAA GCAGGATACC ATTGTGTTAA TAAAGTGCTT GAACATGGTG AATACGCACT ACGTGGATCT ATTATTGACG TGTATCCGAT GGGTAGTGGT TTACCTTTCC GTATCGAGCT ATTTGATGAT GAAATTGAAA GTCTCAGAGA ATTTGATCCG GAAACACAAC GCACAATAGA AAAAATCAAT CAAATCCATT TGTTACCTGC TCGTGAATTT CCATTAAATG AACAAAGCCA ATTACACTTC CGACGAGCTT TCAGAGAGTC TTTTCCTGGA AATCCCAGCC ATTGCCCAAT ATACGAAGCA ATTAGTAACA GTCAATTTCC ATCTGGCATA GAATATTATC TGCCCTTGTT TTTTGATAAA ACCGTTACCT TTTTTGATTA TCTGCCAGCC AATGCCAAAA TTTGTTTAAT TGAAGAAACC CAAGAGAATG CTGAGAGATT CTGGCGAGAA TTAAATGAAC GCTATGAACA ACGGCGTCAT GATGTCAGCC GCCCTATTTT AACCCCAGAT AACTGCTTTA TTAATCCCAC CGAATTATTA ACTAAAGCTA ACAATTATGA ACAAGTACGC CTGTATCATA AGCCTTCCGA AAAAAAAGGA GCCTTAAATT TCAATATTGC CAAAGCTCCA CAACTCCCCA TTGACAGGAA AAATATTGAG CCACTCCGCC AATTAAGTGA GTATTGTTCT GACCCAACGC GACGCTATCT TATTGTTGTT GAAAGCGCTG GGCGTCGCGA AGTATTACTG GATCTGCTTA AATCAAGCCA TATCATTCCA AGAACACAAA ACTCGTGGTT GGACTTCATT TACGATGAAT CCCCCATCAA TATAACTACT GGCCCATTGA TTTATGGCTG TGAATTAACC GACAAACAAA TTGTGATCAT CGTTGAGTCG CAATTATTTG GTGAACAAAG CACACCTCAA CGCCGAAGCA CTCAAAAATC AGTTGATCCC GACTTAATCA TACGAGATAT GGCCGAACTT CGATTGGGCG CTCCTGTTGT ACATCTTCAA TTTGGAGTAG GTCGCTATCA AGGTTTGCAA TACATCGACT CCAATGGTAC CCCCAGTGAG TTCCTCGTCC TTGCTTATGC AGGGGATGAC AAAATCTATG TCCCAGTCAC TTCTCTGCAT ATGATAAGCC GGTATACTGG TGTGGACAGT GAACACGCCC CTTTGCATAA ACTGGGTTCT GATCAATGGC AAAAGGAAAA AAAGAAAGCG GCCGAGAAGA TTCATGATGT TGCAATTGAG TTATTGGATC TCTATGCTAA AAGAGAAGCC CAGCCAGGGC ACCAATACGA TTTCAATCAA TCCGAATATA TAAAATTCGC CAGTGGCTTC CCCTTTACAG AAACACCAGA TCAACTTCAG GCTATTGAAC AAATTATTAG GGACATGCAA TCACCAAGAC CGATGGATCG CCTAATCTGT GGTGATGTAG GATTTGGCAA AACAGAAGTC GCCATGCGTG CTGCATTCGT AGCAGTACAA AATGGAAAAC AAGTCTGTAT CCTTGCTCCA ACTACCTTGC TTGCAGGACA ACATTTTGAG TCATTTCGCG ATAGATTTGC AGAGTTTCCT GTTAATATTG AATTATTATC CCGCTTTCGC AGTAATAAAG AGTCCGAAGC AGTCCTTGCC GCATTGCAAT CAGGTAAAGT AGATATTGTG ATTGGAACCC ATAAATTATT CCAAAATAAT ATTTCTTTCA AAAACCTGGG ATTACTGATT ATTGATGAAG AACATCGATT TGGAGTGAAA CAAAAGGAAC ATATTAAATC GCTTCGTACT CATGTTGATA TTTTATCCAT GACTGCTACT CCAATTCCCA GAACCTTGAA CATGGCAATG GCGGGAATCA GAGATATTTC ACTTATTGCA ACACCGCCCG CCAAGCGTTT GGCGATTAAA ACATTTTGGC AAGAAAAAAA TGATCTCACC ATACGAGAAG CGATATTGCG CGAAATATTA AGGGGAGGGC AAGTATTTTA CCTGCACAAT AATGTACAAA CTATAGAAAG AGTTTGCCAG GATCTGGAAG CTTTAGTGCC CGAAGCAAAA ATTCAAAGCG CACATGGGCA AATGCGAGAA AGGCAATTAG AGCGCATCAT GTCTGATTTT TATCATCACC GATTTAATGT CCTGGTTTGC ACAACCATCA TTGAAACAGG GATCGATATT CCAACGGCCA ATACCATTAT TATCGATCGT GCCGATAAAT TTGGATTAGC CCAGCTGCAT CAATTACGTG GTCGTGTTGG ACGCTCTCAT CATCAAGCCT ACGCTTACTT ATTAACTCCC AATGAAAAAC TGTTAACGCC AGATGCAGTG AAACGTCTCG AAGCCATTGT GTCTTTAGAA GATTTGGGAG CAGGGTTCAC CTTGGCAACA CACGATCTGG AAATTCGTGG AGCAGGTGAA CTCCTTGGTG AAGAACAAAG TGGTAATATG CATGCCATAG GATTTAATTT ATTTATGGAA ATGCTTGACC GTGCCGTTAA CGATTTAAAG GCAGGTAAAA CTCCTGAATT GTCAGCACCA ATGCATCAAG GACCTGAAAT TGACTTGAGA ATTAGCGCGA TTATCCCCGA AGATTACATA GGTGATATAC ACAATAGACT CATCATGTAT AAAAGAATTG CTAATGCAAA AACTACCCAA CAACTTAGAG AACTACAAAT AGAACTGATA GACCGGTTTG GTTTACTCCC ACAACCTGTC AAACATCTGT TTTTGATTAC TGAATTAAAG TTAAAAGCAG CACAGCTCGG TATTCAAAAA ATCAGTGCCA GTGCTCAACA AGGTAAATTG GATTTTAGTG AAAAACCATC GATTGACCCT GGAACACTGA TTAGCTTAAT ACAAGTACAT GCCAAACGCT ATCAAATGGA AGGACCGCAA CGTCTGCGTT TTACTCTAGA CAGCACGTCA GCAGAGGAAC GAATATTTGA AATCAGTTCT TTATTAAATA AACTGTCTCC TCATTCCCAA ACGATTGACT GA
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Protein sequence | MNTKTLLYQP TKNKQIWGQL YGSSLALALA EYCQQTPGIK LLITQDNLCA SQLQDELQFF LNPNQNTQEL LFFPDWETLP YDQFSPHQDI ISERLYTLSR VQQITNGIII SSASTLMHRL SPPEFLNQYA LMLKEGQKLD LNSFRNQLQQ AGYHCVNKVL EHGEYALRGS IIDVYPMGSG LPFRIELFDD EIESLREFDP ETQRTIEKIN QIHLLPAREF PLNEQSQLHF RRAFRESFPG NPSHCPIYEA ISNSQFPSGI EYYLPLFFDK TVTFFDYLPA NAKICLIEET QENAERFWRE LNERYEQRRH DVSRPILTPD NCFINPTELL TKANNYEQVR LYHKPSEKKG ALNFNIAKAP QLPIDRKNIE PLRQLSEYCS DPTRRYLIVV ESAGRREVLL DLLKSSHIIP RTQNSWLDFI YDESPINITT GPLIYGCELT DKQIVIIVES QLFGEQSTPQ RRSTQKSVDP DLIIRDMAEL RLGAPVVHLQ FGVGRYQGLQ YIDSNGTPSE FLVLAYAGDD KIYVPVTSLH MISRYTGVDS EHAPLHKLGS DQWQKEKKKA AEKIHDVAIE LLDLYAKREA QPGHQYDFNQ SEYIKFASGF PFTETPDQLQ AIEQIIRDMQ SPRPMDRLIC GDVGFGKTEV AMRAAFVAVQ NGKQVCILAP TTLLAGQHFE SFRDRFAEFP VNIELLSRFR SNKESEAVLA ALQSGKVDIV IGTHKLFQNN ISFKNLGLLI IDEEHRFGVK QKEHIKSLRT HVDILSMTAT PIPRTLNMAM AGIRDISLIA TPPAKRLAIK TFWQEKNDLT IREAILREIL RGGQVFYLHN NVQTIERVCQ DLEALVPEAK IQSAHGQMRE RQLERIMSDF YHHRFNVLVC TTIIETGIDI PTANTIIIDR ADKFGLAQLH QLRGRVGRSH HQAYAYLLTP NEKLLTPDAV KRLEAIVSLE DLGAGFTLAT HDLEIRGAGE LLGEEQSGNM HAIGFNLFME MLDRAVNDLK AGKTPELSAP MHQGPEIDLR ISAIIPEDYI GDIHNRLIMY KRIANAKTTQ QLRELQIELI DRFGLLPQPV KHLFLITELK LKAAQLGIQK ISASAQQGKL DFSEKPSIDP GTLISLIQVH AKRYQMEGPQ RLRFTLDSTS AEERIFEISS LLNKLSPHSQ TID
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