Gene lpp1005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus taglpp1005 
SymbolrecO 
ID3116427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLegionella pneumophila str. Paris 
KingdomBacteria 
Replicon accessionNC_006368 
Strand
Start bp1116514 
End bp1117203 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content43% 
IMG OID637579700 
ProductDNA repair protein recO 
Protein accessionYP_123333 
Protein GI54296964 
COG category[L] Replication, recombination and repair 
COG ID[COG1381] Recombinational DNA repair protein (RecF pathway) 
TIGRFAM ID[TIGR00613] DNA repair protein RecO 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAGTA AATCGCTGAA TGCTTGGGTA ATTCATAAGC AATGGTCTGG AGATACCAGT 
GCCAGACTAA AGCTTTTTAC TAGGGAACTG GGATTAATTA ATTGCTTGTG CAAGGGGGGG
CGAACTCCCA AGAAACAGTC ATTACTTCAA GCTTTTATTC CTCTGTGGGT TAGTATTGAA
GAGCGTTATG ATCAATATTA CACACGAAAC ATTGAAAGCA CTTCTTCCAG ACTGGATCTT
GAGGGACATT CTCTTTTTTC AGGCCTGTAT ATCAATGAGT TACTCTATTA TACGCTGAGC
CCGGATTTCC CTGACTCGGA TTTATTTGAT GCTTACTTGT TCACCTTAAA TGGCATAGCA
TTAGCTAGAG AAAGAGAGGC GATAGAAGCT TTGCTGCGTC GCTTTGAATG GGCTTTGCTT
AAGGCTTGTG GATACACATT TTCATTTCTT CATGAGGCGC GAACGGGAGA GTTAATTGTT
CCCGATTCTC ATTACCAATT TGTAGCTGGG GAGGGCTTTA TTTTAGGTGG TGATAAAAAA
ATACCTGGTG AGCACTTACT TGCTATAGCG GCAGATAATT TAAGCGAGTC CGCTTATTTA
AAATCAGCGA AATTCATTAT GCGTCAGGCA ATCGATCATC TTTTGGGGGG ACGGGAAATC
AAGGCCCGGT CCTTGTATGG ACCGGCCTGA
 
Protein sequence
MTSKSLNAWV IHKQWSGDTS ARLKLFTREL GLINCLCKGG RTPKKQSLLQ AFIPLWVSIE 
ERYDQYYTRN IESTSSRLDL EGHSLFSGLY INELLYYTLS PDFPDSDLFD AYLFTLNGIA
LAREREAIEA LLRRFEWALL KACGYTFSFL HEARTGELIV PDSHYQFVAG EGFILGGDKK
IPGEHLLAIA ADNLSESAYL KSAKFIMRQA IDHLLGGREI KARSLYGPA