Gene lpp0948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus taglpp0948 
SymboldapE 
ID3119485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLegionella pneumophila str. Paris 
KingdomBacteria 
Replicon accessionNC_006368 
Strand- 
Start bp1052594 
End bp1053727 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content41% 
IMG OID637579643 
Productsuccinyl-diaminopimelate desuccinylase 
Protein accessionYP_123276 
Protein GI54296907 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 
TIGRFAM ID[TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGATA TTAAGCAAAT TCTGACTGAC CTCATTGGTT TTCCTTCTAT TACACCAGAA 
GATGCTGGCT GCCAAAAATA CATGATTCAA TTTCTGGAGC AATTGGGATT TACTTGTCAA 
CAACTGAATA ATGGGCCCGT ATCCAATTTT TTTGCCTGCT ATGGCAAAAT TGGGCCTTTA 
TTGGTGTTCG CAGGCCATAC CGATGTAGTT CCTGTTGGTG AAGTATCAAA ATGGGATACA 
GACCCTTTCT CTCTCGAAGA AAAAAGTGGC GTGCTCTATG GTCGTGGGGT TGCTGATATG 
AAAGGCAGCC TGGCCTGTAT GTTGCATATG GCCAGAAGAT TTATTAAAAC TTATCCTTCC 
TTTCCAGGCA GACTAGGATT TCTGATCACC AGTGGCGAAG AAGGCGATGA ATTTAATTTG 
GGCACCCCTT ATGTGATGCA AAAACTGGAG CAGCAAGGGA TTGTTATTGA TTATTGCATA 
GTAGGTGAAC CTTCAAGCAG CTTGAAAGCT GGTGATGTCA TCAAAATTGG AAGGCGTGGA 
TCATTAAGTG CCAAAATACA TCTGAGCGGA AAGCAAGGCC ATGTTGCCTA TCCGCATTTG 
GCTGACAATC CAATTCATAG AATTAGCCCA GTATTAGCCG AACTCACTTC AATGCAATGG 
GATAATGGCA ATGCTTTTTT TCCCCCTACC TCCATGCAAA TAACTTATAT TCATTGTGGA 
GGGCATGCGG GTAATATTAT CCCAGGCGAA TTAAATCTGC ATTTGAACTT TAGATATTCG 
ACAGAGCAAA CAGACGAGTC GTTAAAAACG AGAGTAATTA ATGCCTTTAC ACACCATAAT 
CTTAACCCCG CTATAGAATG GCGATTAAAT GGCGAACCAT TCTTAACGAA TAAAGGCATA 
TTGCTAGAAA GCTGCAAACA AACAGTGCTT GAACATATTG GGACTCTCCC CGAACTTTCA 
ACAAGTGGTG GAACTTCAGA TGGGCGTTTT ATAGCACCTT ATGGGGTTGA GGTCATAGAG 
CTGGGACTGG TAAATGCAAC CATTCATCAG GTTAATGAAT GCACTTCTCT ACAGGATTTG 
AATACACTTG AAACCATGTA TTTTTCAATC TGTGAGAAAT TGTTAATTGA CTAA
 
Protein sequence
MTDIKQILTD LIGFPSITPE DAGCQKYMIQ FLEQLGFTCQ QLNNGPVSNF FACYGKIGPL 
LVFAGHTDVV PVGEVSKWDT DPFSLEEKSG VLYGRGVADM KGSLACMLHM ARRFIKTYPS 
FPGRLGFLIT SGEEGDEFNL GTPYVMQKLE QQGIVIDYCI VGEPSSSLKA GDVIKIGRRG 
SLSAKIHLSG KQGHVAYPHL ADNPIHRISP VLAELTSMQW DNGNAFFPPT SMQITYIHCG 
GHAGNIIPGE LNLHLNFRYS TEQTDESLKT RVINAFTHHN LNPAIEWRLN GEPFLTNKGI 
LLESCKQTVL EHIGTLPELS TSGGTSDGRF IAPYGVEVIE LGLVNATIHQ VNECTSLQDL 
NTLETMYFSI CEKLLID