Gene lpp0549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus taglpp0549 
SymbolhflC 
ID3118951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLegionella pneumophila str. Paris 
KingdomBacteria 
Replicon accessionNC_006368 
Strand+ 
Start bp595788 
End bp596716 
Gene Length929 bp 
Protein Length304 aa 
Translation table11 
GC content38% 
IMG OID637579245 
Productmembrane protease subunit HflC 
Protein accessionYP_122887 
Protein GI54296518 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID[TIGR01932] HflC protein 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GGGAGAGATT GAGAATGAAT GCATTTAAAA CGACATTGGG TGTCTTAATC TTTTTGGTAC 
TAGTGCTTTT GTTTACCACT ATGTTTACTG TCACGCAAGG ACAGCAGGGT ATTATTTTAC 
GTTTAGGACG TTTGGTAAAA GATCCTCAAA CTGACGCAGT GAAAGTGTTA AATCCTGGGC 
TCCACTTTAA AACCCCTTTT ATCGAAAGTG TGCGAATTTT CGATACACGC ATCCAAACCA 
TGGATATCAA ATCGACCCGT ATTGTGACCA AAGAGAAAAA AGATGTCATG GTTGACTATT 
ATGTGAAATG GCGAATTTCA GATTTGGCCC AGTATTTTAA ATCAACAGGT GGAAATGAAT 
TTAAAGCTGA AACTTTGCTA GAACAACAGT TAAATACCTT ACTCAGAGCC CAATTTGGTA 
AGCGTACCAT ATCCGATGCT GTTTCAGGAG GGCGTGATGA TGTTATGGAA ATACTGCGTA 
ATGCTGCTGA GAAGCAAGCT GGTGAATTAG GTATTAAAGT GGTTGATGTT CGTATTAAAG 
GTATTGAATT GCCTTCAAAT ACCAGTAATG CCATCTATCA ACGCATGAGA GCTGACATGC 
AAAAAATTGC AAACAGACAT AGAGCTGATG GACAAGCTGC CGCAGAACAG ATCCAGGCAA 
AAGCTGATGC TGATGTCACG GTTTTATTGG CTAAAACTAA TAGTAATGCT CAGCGAATTA 
GAGCAGTTGG TGAAGCGGAA GCAGCGGCTA TCTATTCCAA AGCATACACT CAAAATCCTG 
ATTTTTTTGC ATTATACAAG AGCTTGCTAG CCTATGAAGC CAGTTTTCAT AGTAAAAAAG 
ATATTTTAAT ATTGGATCAA AGCAGTTCAT TTTTTGATTA TTTCAAACAA GCTATGCCAA 
AAAATGATGG TACAGCGGCT AAAAAGTAA
 
Protein sequence
MNAFKTTLGV LIFLVLVLLF TTMFTVTQGQ QGIILRLGRL VKDPQTDAVK VLNPGLHFKT 
PFIESVRIFD TRIQTMDIKS TRIVTKEKKD VMVDYYVKWR ISDLAQYFKS TGGNEFKAET 
LLEQQLNTLL RAQFGKRTIS DAVSGGRDDV MEILRNAAEK QAGELGIKVV DVRIKGIELP 
SNTSNAIYQR MRADMQKIAN RHRADGQAAA EQIQAKADAD VTVLLAKTNS NAQRIRAVGE 
AEAAAIYSKA YTQNPDFFAL YKSLLAYEAS FHSKKDILIL DQSSSFFDYF KQAMPKNDGT 
AAKK