| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | lpp0542 |
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| Symbol | rpoN |
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| ID | 3119656 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Legionella pneumophila str. Paris |
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| Kingdom | Bacteria |
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| Replicon accession | NC_006368 |
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| Strand | - |
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| Start bp | 588785 |
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| End bp | 590179 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637579238 |
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| Product | RNA polymerase factor sigma-54 |
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| Protein accession | YP_122880 |
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| Protein GI | 54296511 |
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| COG category | [K] Transcription |
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| COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
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| TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACCGA CATTGCAGAT TGGTATTGGT CAACATCTCA CGTTAACCCC ACAACTGCAA
CAAGCCATAA GACTGCTGCA ATTATCCACC TTTGATTTAC AACAAGAAAT TCAACTCGTT
GTTGAATCAA ATCCTTTGCT TGAAGCCACT CCTGTTGAAG AAAAAGAAGA CGCCCAAATA
AATACCAATC AGAACCAAGA TGAATATTCA GATTTTCAAT GGTCACAACT GTATAATAAC
TTAAACAAGC GCAATAATTT TGAAGAAAAT GATTACAATT TTGATAATTT ACACTGCACT
ACCACCAATT TACAAGATCA TCTTAACTGG CAACTTGACC TGACGCCTAT GAGCGATATT
GACCGAGTCA TTGCTACAAC AATTATTGAT GCGATAAACG ATGACGGCTT TTTAACTATA
CCCGTTTCTG AAATTCACGC CAGCTTAAAT AGCGATGATT TTCCTCTGGA TATAGAAGAA
ATAGAAGCAG TGAGACACAG GCTTCAATTA TTTGACCCCG TAGGATGCGC ATCTGTTAAT
TTAGCAGAAA CACTCGTTTT GCAATTGGAG CAACTTCCAC TGGAACCCAA GCTTCTGGCT
ACTGCCAAGA AAGTCATTCT TGAAGACATT GAGTTGCTAG GGCAACATAA CTACAGACAA
CTCATGAAAA ATCATCAAAT AAGTGAAAAA ACAATTCATG AAATATTACA AGTCATTCAT
AAATTAAATC CAAAACCAGG AAGTTTGATC CATCAAGATA ATATTGAATA TGTTATTCCC
GACTTAACTG TTAAAAAGAT AGATAATCAA TGGAAAGTTT TTTTGAATCA AGATATTCTT
CCCAGGCTGA GTATCAATAG CCAATATGCC GCTTTAATCC AACGCGCAAA CAATAGTCTG
GATAATCAAT TCTTAAAGCA TAATTTACAA GAAGCACGTT GGTTTTTAAA AAGCATTCAA
AGCCGTCAGG AAACACTTCT AAAAGTAGCA ACCTGTATCA TGGAATACCA ACATGGATTT
CTGGAATTTG GTGAAGAAGC GATGAAACCA TTAATATTGA ATGATGTAGC TTCTGCCTTG
GATATGCATG AATCAACGGT ATCAAGAGTG ACAACTCAAA AATTTATTAA CACTCCTCGA
GGTGTTTTTG AGTTAAAGTA CTTCTTCTCC AGCCATGTGA ATACTGATAG CGGAGGAGAA
TGCTCTTCCA CCGCAATCCG AGCGGTAATA AAAAAATTAA TTTCAACAGA GAATAGAAAA
AAACCTTTGA GTGATAGTAA AATTGCCCAA CTAATAGGTG AGCAAGGCAT TAAAGTAGCA
AGACGTACTG TTGCCAAATA TCGCGAAGCA ATGGGGATTC CCCCATCCAA TGAAAGAAAG
GTTATTAGTA GTTAA
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| Protein sequence | MKPTLQIGIG QHLTLTPQLQ QAIRLLQLST FDLQQEIQLV VESNPLLEAT PVEEKEDAQI
NTNQNQDEYS DFQWSQLYNN LNKRNNFEEN DYNFDNLHCT TTNLQDHLNW QLDLTPMSDI
DRVIATTIID AINDDGFLTI PVSEIHASLN SDDFPLDIEE IEAVRHRLQL FDPVGCASVN
LAETLVLQLE QLPLEPKLLA TAKKVILEDI ELLGQHNYRQ LMKNHQISEK TIHEILQVIH
KLNPKPGSLI HQDNIEYVIP DLTVKKIDNQ WKVFLNQDIL PRLSINSQYA ALIQRANNSL
DNQFLKHNLQ EARWFLKSIQ SRQETLLKVA TCIMEYQHGF LEFGEEAMKP LILNDVASAL
DMHESTVSRV TTQKFINTPR GVFELKYFFS SHVNTDSGGE CSSTAIRAVI KKLISTENRK
KPLSDSKIAQ LIGEQGIKVA RRTVAKYREA MGIPPSNERK VISS
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