Gene lpp0488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus taglpp0488 
Symbol 
ID3118201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLegionella pneumophila str. Paris 
KingdomBacteria 
Replicon accessionNC_006368 
Strand
Start bp531894 
End bp533326 
Gene Length1433 bp 
Protein Length473 aa 
Translation table11 
GC content40% 
IMG OID637579184 
Producthypothetical protein 
Protein accessionYP_122826 
Protein GI54296457 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00879] MFS transporter, sugar porter (SP) family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
AGGAGTGAAA AATGGCTTGG ATTGTCGCAA TAATTGGGTC AATTGCCGGT TTTTTATTTG 
GTTACGATGA GGGAATAATA GCAGGTTCTC TTGGACTGGT AAAAAATCAT TTTAATCTGA
ATGCAACCCA CATTGGTGTT ATGGCTTCTG CTTTACCTTT TGGGGCATTG TTTGGTTCGC
TGTTGATTGG TGCATTCATG GCATCAAAGA GCGTAAAACG TTTCGGCAGA CGTTCTTTAT
TATCCTTTGC CGGTTTTTTG TTCTTTGTTG GAGCCCTGGG TGCCGGTTTT GCTGAAACCA
TTTCAATGCT GATTTTATCT CGGTTAATTT TAGGTTTGGC CATTGGAATG GCTTCAGTTT
TAACTCCATT ATACCTGGCT GAAACAGCCG CTATGCGATC ACGTGGTGCA GTGGTTGCAA
TTTATCAACT TGCATTGACT GTGGGTATTG TTTGTTCTTA TTCGGTCAAT TATTTATTGA
TAGAGCAGCA AGCGTGGCGT GCAATGTTTG CTTCAAGTGC TATCCCTGCC TTGTTATTGA
CCCTGGGGAT TTTGTTTATG CCGGAGTCTC CCAGGTGGTT ATGCAGCGTT GGACGTCATG
ATGCAGCAGC AAACTCCTTA AGAAAATTGA GAGGCAAACA ACCAGTTGAG CAAGAGTTAA
AAGATATTGA AGCCACACTG GCGAACGAAC CAAAACAAGG CAACTGGCTA CTTCTATTCC
AAAAACCCTT GTTACCTGTG TTGATGTTAG GAACGATATT GTTTTGTTTA CAACAATTAA
GCGGTATCAA TGTGGTAATT TATTTTGCAC CAGAAATATT CAAGAATTTA GGCTTGGGCA
GCACGACTGG ACAAATATTA GCAACAATGG GGATTGGGTT AGTTAATTTA CTGGTTACTA
TTATTGCCAT TTTGTATGTC GATAAGCTAG GGCGACGCAA ATTACTGTTA CTGGGTTTTG
CAGGAACCAG TTTGAGTTTG TTTGCATTAT CGTTGTTTTC ATTAAATCAT GTTGCCTGGC
TATCTTATTT ATCCGTTATT TGCTTAATGG TTTATATTTT CTCTTTTGCA ATCAGCGTGG
GCCCTATCCC GCACATTGCT ATGGCAGAAA TTTTTCCTCT TCATGTCCGT GGTGCCGGTA
TGGGGATGTC ATCCATGAGT AATTGGTCAT TTAATACTAT AGTTATTTTT AGTTTTCCTG
TTCTGCATCA AATGTTTGGT ATAGAAGTGA CTTTCGTTCT GTATGCGGTA ATCTGTTTCC
TAGGGTTCAT TTATGCTTAT ATTTATATGC CTGAAACCAG GAATATTAGT TTAGAGCAGA
TAGAAACTTA TATAATGAGT GGCAAGCCAT TACGGTTTTT AGGTAGAGAG GATGAAGAGG
TTAATGCTGT GTCAACTAAA TCGGAATCTT CTTTGCTGGC TTCAACAAAT TGA
 
Protein sequence
MAWIVAIIGS IAGFLFGYDE GIIAGSLGLV KNHFNLNATH IGVMASALPF GALFGSLLIG 
AFMASKSVKR FGRRSLLSFA GFLFFVGALG AGFAETISML ILSRLILGLA IGMASVLTPL
YLAETAAMRS RGAVVAIYQL ALTVGIVCSY SVNYLLIEQQ AWRAMFASSA IPALLLTLGI
LFMPESPRWL CSVGRHDAAA NSLRKLRGKQ PVEQELKDIE ATLANEPKQG NWLLLFQKPL
LPVLMLGTIL FCLQQLSGIN VVIYFAPEIF KNLGLGSTTG QILATMGIGL VNLLVTIIAI
LYVDKLGRRK LLLLGFAGTS LSLFALSLFS LNHVAWLSYL SVICLMVYIF SFAISVGPIP
HIAMAEIFPL HVRGAGMGMS SMSNWSFNTI VIFSFPVLHQ MFGIEVTFVL YAVICFLGFI
YAYIYMPETR NISLEQIETY IMSGKPLRFL GREDEEVNAV STKSESSLLA STN