Gene lpp0419 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus taglpp0419 
SymbolrpoA 
ID3118638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLegionella pneumophila str. Paris 
KingdomBacteria 
Replicon accessionNC_006368 
Strand+ 
Start bp467994 
End bp469001 
Gene Length1008 bp 
Protein Length330 aa 
Translation table11 
GC content37% 
IMG OID637579117 
ProductDNA-directed RNA polymerase subunit alpha 
Protein accessionYP_122759 
Protein GI54296390 
COG category[K] Transcription 
COG ID[COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit 
TIGRFAM ID[TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CGGAGAGATA GCTGAATGTA TACTGAAATC AATGAAATGT TGACGCCTAA GGTTCTCAAA 
GTACAGGCCG AGTCGCCCTA TAAAGCTAGA ATAGTTTTAG AACCTTTGGA GCGAGGTTTT 
GGTCACACCC TCGGCAATGC TTTGAGAAGA ATCTTATTGT CATCCATGCC AGGCAGTGCC 
ATTACTGAAG CTTCTATCGA TGGTGTTTTG CATGAATATA GTACTATTGA AGGTGTTCAG 
GAAGATGTGG TTGATTTGTT GCTTAACCTA AAATCAGTCG CTATCAAATT GACTGTAGGA 
AACGAAGCGC AGGTTACCCT AAATAAAGAA GGACCATGTC AAGTTACAGC TGGTGATATT 
CAGTTGACTC ATGGTCAAGA AATTATTAAT CCAGAACTTG TCATAGCCAA TCTCAATGAA 
AAGGGTAAAT TAAATATGAC TCTTAAAGTT GAAAGAGGTA TTGGCTTTCA TAATACTGAT 
GCATTTGTTC GCTATCATGA TGATGAAATT GAGAAAAAGA CGGTTGGAAA ATTAAAAATT 
GACAACAGTT TTTCTCCAGT GAAGAAAGTA GCTTATTTCG TCGACAGTGC ACGTGTAGAA 
AACAGAACAG ATTTAGATAA GCTTACTATT GAATTAGAAA CTAACGGTAC TATTGATGCT 
GAAGAGGCAA TAAGAATATC TGCTAGTATA CTACAAAGAC AGCTTCATGC GTTTGTTGAT 
ATGAAATTTG AAGAATCACG TGCTGACAAT AAAGAACGTA ATGATTTTGA TCCTGTATTA 
TTACGTTCAG TGGATGATTT GGAGTTGACT GTTCGATCAG CTAATTGTTT AAAAGCTGAA 
AACATTCATT ATATAGGCGA TTTGGTTCAA AGAACAGAAA GTGAATTATT GAAGACACCT 
AATCTTGGTA AGAAATCACT AACTGAAATT AAAGACGTTT TAGCGTCTCG ATCATTATCG 
CTGGGTATGA AACTTGAGAA TTGGCCGCCA GCAAGCCTTG GCGAGTAA
 
Protein sequence
MYTEINEMLT PKVLKVQAES PYKARIVLEP LERGFGHTLG NALRRILLSS MPGSAITEAS 
IDGVLHEYST IEGVQEDVVD LLLNLKSVAI KLTVGNEAQV TLNKEGPCQV TAGDIQLTHG 
QEIINPELVI ANLNEKGKLN MTLKVERGIG FHNTDAFVRY HDDEIEKKTV GKLKIDNSFS 
PVKKVAYFVD SARVENRTDL DKLTIELETN GTIDAEEAIR ISASILQRQL HAFVDMKFEE 
SRADNKERND FDPVLLRSVD DLELTVRSAN CLKAENIHYI GDLVQRTESE LLKTPNLGKK 
SLTEIKDVLA SRSLSLGMKL ENWPPASLGE