Gene lpp0400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus taglpp0400 
SymbolrpsC 
ID3117390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLegionella pneumophila str. Paris 
KingdomBacteria 
Replicon accessionNC_006368 
Strand+ 
Start bp459339 
End bp459995 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content40% 
IMG OID637579098 
Product30S ribosomal protein S3 
Protein accessionYP_122740 
Protein GI54296371 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0092] Ribosomal protein S3 
TIGRFAM ID[TIGR01009] ribosomal protein S3, bacterial type 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGACAAA AAGTAAACCC AATAGGTATA CGCCTTGGAA TAATTAAAGA TTGGAACTCA 
AAATGGTTTG CAGGAAAGCG ATATGCTGAG TTTTTAATTC AGGATATAAA ACTACGTAAC 
GATCTTAAAA AGAAATTGAT GGCTGCAGCT GTTAGCAAGA TACTTATTGA GCGACCAGCT 
AATAACGCTG TTGTGACTAT CTTAACAGCA AGACCAGGTG TTATTATCGG TAAAAAAGGC 
GGAGGAATTG AAACACTTCG TAAAGAAATT TCCGATAACC TGGGTGTGCC AGTTCATTTG 
AATATTGAAG AAGTGAAAAA GCCTGAGTTG GATGCTACTT TGGTGGCTGA AGGTATTGCT 
CAGCAGTTAG AGCAACGAGT CATGTTCAGA CGAGCTATGA AACGTGCTGT TACCTCTGCT 
CTGAAAGCTG GAGCAAAGGG TATTAAAATT TGTGTAAGTG GCCGATTGGG TGGTGCTGAA 
ATTGCAAGAA GTGAATGGTA CAGAGAGGGA CGAGTGCCTT TACATACTTT TAGAGCTGAT 
ATTGATTATG GTACCGCTGA ATCCAAGACT ACCTACGGAA TTATTGGTGT AAAAGTCTGG 
ATCTTTAAGG GTGAAATTCT CCCGCAAAAG AAAAGATCAA CTGAAAGCGC CCAGTGA
 
Protein sequence
MGQKVNPIGI RLGIIKDWNS KWFAGKRYAE FLIQDIKLRN DLKKKLMAAA VSKILIERPA 
NNAVVTILTA RPGVIIGKKG GGIETLRKEI SDNLGVPVHL NIEEVKKPEL DATLVAEGIA 
QQLEQRVMFR RAMKRAVTSA LKAGAKGIKI CVSGRLGGAE IARSEWYREG RVPLHTFRAD 
IDYGTAESKT TYGIIGVKVW IFKGEILPQK KRSTESAQ