| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | lpp0388 |
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| Symbol | rpoC |
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| ID | 3117364 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Legionella pneumophila str. Paris |
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| Kingdom | Bacteria |
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| Replicon accession | NC_006368 |
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| Strand | + |
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| Start bp | 447392 |
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| End bp | 451597 |
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| Gene Length | 4206 bp |
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| Protein Length | 1401 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637579086 |
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| Product | DNA-directed RNA polymerase subunit beta' |
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| Protein accession | YP_122728 |
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| Protein GI | 54296359 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02386] DNA-directed RNA polymerase, beta' subunit, predominant form |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGACT TACTTGGTAT TCTTAAGCAA CAAGGTCAAA GTGAAGAATT TGATGCAATA
AAAATTGCAT TGGCGTCACC TGAATTAATT CGATCATGGT CCTACGGCGA AGTTAAAAAG
CCTGAAACAA TAAACTACAG GACATTTAAG CCTGAAAGAG ATGGTTTGTT TTGTGCTAAA
ACTTTTGGTC CTGTTAAAGA TTATGAATGT TTGTGTGGAA AGTACAAGCG ACTAAAGCAT
CGTGGTGTTA TTTGCGAGAA GTGTGGGGTT GAATTGGCTC TTGCCAAAGT GAGACGAGAA
AGAATGGGGC ATATCGAACT CGCTAGCCCA GTCGCTCACA TATGGTTCTT AAAATCTTTA
CCATCAAGAA TTGGTTTGCT CCTCGATATG ACTCTAAGAG ATATCGAGAG AGTACTCTAT
TTTGAAGCTT TTGTCGTTGT TGATCCTGGG ATGACAGAGC TTGAAAGAGG GCAACTACTT
AACGACGAAG CCTATCTTGA TGCGATGGAA CAGTATGGTG ATGAGTTTGA CGCGCGTATG
GGCGCAGAAG CAATTCGAGA TTTATTGCGC CAAATTGATC TCGAAGATGA AATTAGAAAT
TTACGTGAAG AACTTCCAAC AACTAACTCT GAGACGAAGA TTAAAAAAAT CACCAAAAGA
CTCAAGTTAT TAGAAGCTTT TTACGAGTCA GGAAATAAAC CAGAATGGAT GATCATGGAT
GTACTTCCAG TGCTTCCACC CGATTTGAGA CCATTGGTTC CGTTAGATGG TGGACGTTTT
GCTACTTCAG ACTTGAATGA TTTATACAGA CGCGTCATTA ATAGGAACAA CCGACTAAAA
CGCTTGCTGG ATCTGAATGC GCCTGACATT ATCGTTCGTA ACGAAAAACG AATGCTGCAA
GAATCCGTAG ATGCTTTACT TGATAACGGC AGAAGAGGTC GTGCCATCAC TGGTACTAAT
AAGAGACCTC TTAAATCATT GGCAGATATG ATTAAAGGTA AACAGGGTCG TTTCAGGCAA
AACCTCTTAG GTAAGCGTGT CGACTACTCT GGACGTTCAG TTATTGTCGT TGGACCAACT
TTAAAATTGC ACCAATGCGG ATTGCCTAAA AAAATGGCGT TGGAGTTATT CAAGCCATTT
ATATTTTCCA AATTGGAATT TAGAGGTTTG GCAACTACTA TTAAAGCGGC CAAGAAAATG
GTCGAAAGAG AAGAATCGGT GGTTTGGGAT ATATTAGATG ATGTTATTAG AGAACATCCT
ATCCTTTTAA ACCGTGCTCC TACATTGCAT AGATTGGGTA TTCAAGCATT TGAACCTGTT
TTAATTGAAG GTAAAGCAAT CCAGCTCCAT CCTTTGGTAT GTACAGCATA CAACGCTGAC
TTCGATGGAG ACCAAATGGC TGTGCACGTG CCCTTGACAC TGGAAGCGCA GCTGGAAGCT
CGTTCATTGA TGATGTCTAC AAACAATATA TTATCTCCAG CCAGTGGCGA GCCAATTATT
GTTCCCAGTC AGGACGTCGT CCTTGGGTTA TACTATTTAA CACGAGAAAA GGTTAATGCA
TTAGGCGAAG GAAAAATATA TTCAAGTGCT CAGGAAGCGC AAAATTTCTA TGAAGCAGGT
CATTTGGATA TCCATGCAAA AATTAAAATT CGTATGCCTA AAGAAGACGG TGAAACTGGA
TATCATTTAG TTGAGACAAC AGTCGGACGC GCTATTTTAG CTGAGATTTT GCCTAAAGGA
ATGCCATTTG ACTATATAAA CCGTACAATG ACAAAAAAGG TTATCTCAAA AGTAATAGAC
AGCTGTTACC GCAAATTCGG CTTGAAAGAA ACAGTCATTT TTGCTGATCA GTTAATGTAT
ACCGGGTTTA AATACGCCAC ACGATCTGGA GCATCCATAG GTATTGAAGA CATGGAAATA
CCAGATGATA AGTCCAGTAT TATTGAACAC GCCGATAATG AAGTAAGAGA AATCGAGTCT
CAATTCAGAT CGGGTTTGGT AACGAATGGT GAACGATACA ACAAAGTAAT TGATATTTGG
TCAAGAACTA ATGAATTAGT TGCCAAATCA ATGATGTCTA AAATTGCAAC AGAAGAAGTC
ACTGATGCAA AAGGCAACAA AGTAAGACAA GAATCATTTA ACCCAATTTT CATGATGGCT
GATTCTGGAG CTAGAGGTTC TGCTGCTCAG ATACGACAGC TTGCCGGGAT GCGAGGTTTG
ATGGCAGCTC CAGATGGCTC AATCATTGAA ACGCCTATCA CTGCAAACTT CCGAGAAGGT
TTGAATGTAT TCCAGTATTT TATTTCTACA CACGGAGCTC GTAAGGGTTT GGCAGATACG
GCGTTAAAAA CAGCAAACTC AGGGTATCTG ACACGGCGTT TGGTAGATGT TGCGCAGGAT
GTTGTTATTA CCGAAGATGA TTGTGGTACT GATACAGGTA TTCTAATGCA ACCACTGATT
GAAGGTGGTG ATATTGTTGA GCCTTTGCAT GAACGCGTCC TTGGGCGGGT GGTTGCTTCA
GATGTCTATA TTCCTACTCA AACTGAACCA GTAGTCAAGG CTGGAACTTT ACTGGATGAA
GAATGGGTTG AAAAATTAGA GAAGCATGGG GTAGACCAGG TTATGGTCAG GTCACCAATC
ACTTGCCAAA CAAGATTTGG TCTTTGTGCA AAATGCTATG GTAGAGATCT TGCTCGTGGG
CATCTTGTCA ATACAGGCGA AGCAGTTGGT ATTATTGCAG CACAATCAAT CGGTGAGCCA
GGAACACAGT TAACCATGCG TACCTTCCAC ATTGGAGGTG CTGCATCAAG GGCAACAGCT
GCGAATAATA TTCAAATTAA AACGAAAGGG GTTATTCGGT TACATAATAT AAAGACCGTA
ACTCATGAGA ATAAAAACCT GGTGGCTGTT TCTCGCTCAG GTGAGGTAAC TATTGTTGAT
GAGTTCGGAC GAGAAAGAGA GCGATATAAA GTTCCTTATG GTGCAGTAAT TTCAGCACAG
GATAATTCTC CTGTTGAAGC TGGCCAGGTT ATTGCAACGT GGGATCCTCA TACGCATCCT
GTTATTTCCG AAGTGTCAGG GCGCTTGAAG TTTGTTGATC TTATTGATGG CATTACAATG
AATAGGCAAA CTGATGAATT AACCGGATTA AGCAATATTG TAATAATTGA TGCCAAACAA
CGGAGTGCGG CAGGTCGAGA TTTGCGCCCA ATGGTAAAAT TGGTTACAGA TGAAGGGGAT
GACATATATC TTGCTGGAAC CAATGTCCCG GCACAATATT ATCTACCTGT CGATGCCATT
GTGAACTTTG AAGATGGAAG TCTGGTGGGA ATAGGAGACG TTATTGCCCG TATTCCGCAA
GAACGTTCTA AAACTCGAGA TATTACCGGA GGTTTGCCAA GAGTAGCGGA CTTATTTGAA
GCCAGAAAAC CAAAGGATTC TGCAGTAATG GCAGAAGTAT CAGGATTGGT TAATTTTGGT
AAAGAAACCA AAGGTAAGCG ACGCTTGATT ATCAATGTAT CGGAAGATCA ATGTCATGAA
GAGCTTATTC CTAAATGGCG TCATATTTCA GTGTTTGAAG GTGAGCACGT AGAGCGTGGT
GAAATCATCG CAGAGGGTGC ACTTAACCCT CATGATATAT TGCGTTTGTT AGGTGTTGGA
GCGCTGGCTA ATTACATTGT AAATGAGGTC CAGGACGTCT ATCGTTTACA AGGTGTGAAA
ATTAATGACA AACACATTGA AGTAATTGTC AGACAAATGC TACGTAAGAG AGTTATTACT
TTCGCTGGTG ACTCAAAATT CCTCGTAGGA GAGCAAGTAG AAGAGAGCGC TATGCTTCAG
GAAAATGATA AACTTCTAGC TGAAGGAAAG CAGATTGCGC GAGGTACTCC TATTTTACTA
GGTATCACAA AAGCTTCATT AGCTACAGAA TCGTTTATAT CAGCAGCTTC ATTCCAAGAG
ACAACCAGAG TCTTGACTGA AGCAGCAGTA AGCGGAAAAG TTGATGAATT GCGTGGTTTA
AAAGAAAACG TGATGGTAGG TCGCCTAATT CCAGCAGGAA CAGGTTATAC TTATCATCAA
AGCCGAAAGG CAAAAAGAGC AAGGGCTGCA GCAGGCGGAG ACAGTTCAGC AACACACACA
GTTACTGCAA GTGATGTTGA ACACGCGTTG AGTGAAGCAT TAAACGCGGA TAATCATGAA
CATTAA
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| Protein sequence | MSDLLGILKQ QGQSEEFDAI KIALASPELI RSWSYGEVKK PETINYRTFK PERDGLFCAK
TFGPVKDYEC LCGKYKRLKH RGVICEKCGV ELALAKVRRE RMGHIELASP VAHIWFLKSL
PSRIGLLLDM TLRDIERVLY FEAFVVVDPG MTELERGQLL NDEAYLDAME QYGDEFDARM
GAEAIRDLLR QIDLEDEIRN LREELPTTNS ETKIKKITKR LKLLEAFYES GNKPEWMIMD
VLPVLPPDLR PLVPLDGGRF ATSDLNDLYR RVINRNNRLK RLLDLNAPDI IVRNEKRMLQ
ESVDALLDNG RRGRAITGTN KRPLKSLADM IKGKQGRFRQ NLLGKRVDYS GRSVIVVGPT
LKLHQCGLPK KMALELFKPF IFSKLEFRGL ATTIKAAKKM VEREESVVWD ILDDVIREHP
ILLNRAPTLH RLGIQAFEPV LIEGKAIQLH PLVCTAYNAD FDGDQMAVHV PLTLEAQLEA
RSLMMSTNNI LSPASGEPII VPSQDVVLGL YYLTREKVNA LGEGKIYSSA QEAQNFYEAG
HLDIHAKIKI RMPKEDGETG YHLVETTVGR AILAEILPKG MPFDYINRTM TKKVISKVID
SCYRKFGLKE TVIFADQLMY TGFKYATRSG ASIGIEDMEI PDDKSSIIEH ADNEVREIES
QFRSGLVTNG ERYNKVIDIW SRTNELVAKS MMSKIATEEV TDAKGNKVRQ ESFNPIFMMA
DSGARGSAAQ IRQLAGMRGL MAAPDGSIIE TPITANFREG LNVFQYFIST HGARKGLADT
ALKTANSGYL TRRLVDVAQD VVITEDDCGT DTGILMQPLI EGGDIVEPLH ERVLGRVVAS
DVYIPTQTEP VVKAGTLLDE EWVEKLEKHG VDQVMVRSPI TCQTRFGLCA KCYGRDLARG
HLVNTGEAVG IIAAQSIGEP GTQLTMRTFH IGGAASRATA ANNIQIKTKG VIRLHNIKTV
THENKNLVAV SRSGEVTIVD EFGRERERYK VPYGAVISAQ DNSPVEAGQV IATWDPHTHP
VISEVSGRLK FVDLIDGITM NRQTDELTGL SNIVIIDAKQ RSAAGRDLRP MVKLVTDEGD
DIYLAGTNVP AQYYLPVDAI VNFEDGSLVG IGDVIARIPQ ERSKTRDITG GLPRVADLFE
ARKPKDSAVM AEVSGLVNFG KETKGKRRLI INVSEDQCHE ELIPKWRHIS VFEGEHVERG
EIIAEGALNP HDILRLLGVG ALANYIVNEV QDVYRLQGVK INDKHIEVIV RQMLRKRVIT
FAGDSKFLVG EQVEESAMLQ ENDKLLAEGK QIARGTPILL GITKASLATE SFISAASFQE
TTRVLTEAAV SGKVDELRGL KENVMVGRLI PAGTGYTYHQ SRKAKRARAA AGGDSSATHT
VTASDVEHAL SEALNADNHE H
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