| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | lpp0304 |
|---|
| Symbol | sidE |
|---|
| ID | 3116613 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Legionella pneumophila str. Paris |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_006368 |
|---|
| Strand | - |
|---|
| Start bp | 340555 |
|---|
| End bp | 345045 |
|---|
| Gene Length | 4491 bp |
|---|
| Protein Length | 1496 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637578993 |
|---|
| Product | SidE protein, substrate of the Dot/Icm system |
|---|
| Protein accession | YP_122644 |
|---|
| Protein GI | 54296275 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0419] ATPase involved in DNA repair |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTAAGT ACGTTGAAGG GATAGAATTA ACCCAAGAAG GGATGCATGC TATTTTTGAA
CGCATGGGAC ATCCAAATAT TACCAGCGGT ACTATCTACA ACGGAGAGCC TACAATTGAT
AAAGGTGCTC TCGACAGGCA AGGCTTTATG CCAGTATTGA CCGGGGTCAG CCCAAGGCAA
GACTCGGGAC ATTGGATTAT GTTAATTAAA GGTCAAGGCA ATCAATATTT CCTCTTTGAC
CCACTGGGAG AAAGCTCGGG AAAATATTAC CAAAATATTT TAGCTAAAAA ACTACCTGGC
GCTACGCTTT CTGTTATTCC TAACGATGCT GGATTAAATA TGGGATTATG CGGCTATTGG
GTTGCATCAG TTGGTTTAAG AGCTCATGCG GCATTAACAC AACCTATCCC CCCCTCATTA
AGAAATCTGG GTCAAACCAT TACCCAGGAA ATGCGGGATG AACTAACACA AGATGGAAGC
GAAAAAATTA CACAATGGTT ACGGGCCGTT GGCAATGAAT TTCCAGAGGG TGATATACAA
CCTGATGCCA CCGCCTTAAG ACGTGCTACT GAAAAGAATT TACGCATTGA TGAACTTCAG
CCTGTTTTTG CAGGAACAAC ACCCAAAGAA ATCTCGATAA ATCCTACTGC TCCTCAAGAG
ACATCCGTTC CTACCTGGAA TGGTTTTTCC TTATATACTG ATGAAATCGT GAGAAATGCA
GCCCGATACG CGTATGATAA TTATTTGGGG AAACCGTATA CCGGTACAGT AGAAGCGACA
CCTGTCAATT TTGGCGGGCA AATGGTGTAC AGACAACACC ATGGTCTTGC CCACACATTA
CGCACCATGG CCTATGCGGA AATCATTGTT GAGGAAGCGC GTAAAGCAAA ATTAAGGGGT
GAATCATTAA AAACATTTGC TGATGGTCGT ACTCTGGCAG ATGTCACGCC TGAAGAATTG
AGAAAAATCA TGATCGCCCA GGCATTCTTT GTCACCGGAA GAGACGATGA AGAATCCTCC
AAAAATTATG AAAAATACCA CGAACAAAGC AGAGATGCTT TTTTAAAGTA TGTCGAAGAC
AATAAATCTG CTTTAATTCC CGATGTATTC AAAGATGAAA AAGATGTCAA ATTCTATGCT
GATGTCATTG AGGATAAAGA TCATAAATGG GCAGATTCTC CAGCTCATGT CCTGGTCAAT
CAGGGCCATA TGGTTGATTT AGTCAGAGTA AAGCAACCCC CTGAATCTTA TCTGGAATAC
TATTTTTCAG AACTTCAACC TTGGATAGGC TCAAAAGCAG CTGAAGCCGT TTTTGCGGCA
CAGAGACAAT TCTTCCATGC CACTTATGAG GCAGTTGCAG GTTTTAATAG CGAAAACACA
GAACCTCATC TGGTGGTTGA TGGCTTGGGG CGCTATGTGA TTGAGCCTGA TGGTAATCCA
ATACGCGAAG AAACTGATGA CGAAGACGAG GAAGAGTCTG GTGAATTAAA GTTTTTCTCA
CAAAAAAAGA AACTCGAGAA AAACCAACGT TACATGCGCG TTGATGAATA TTTAAAACTT
GATGAGGTAC AAAAGCGATT CCCTGGCGCT GGCAAAAAAC TCGATGGGGG ATTGCCAGGA
CTGAGTGAAT ATCAATATTT ACAGCGCTTG AACTCAATAA ACAGAGCGCG GTGTGAAAAC
GATGTCGACT TTTGTTTGGG GCAACTACAA ACAGCTCATC ATCAAACCAA AATCACTCCA
ATAAAGAGAG CATTTCAATC GAGCTCTGAG AAAGAGCGAA GACAACCCAA TATGGATGAA
ATTGCTGCTG CACGTATTGT TCAGCAAATC ATGGCCAATC CTGATTGCAT CCATGACGAT
CATGTCTTCC TTAACGGTCA AAAACTGGAA GAAAACTTCT TTCGTGATTT GTTGGCGAAA
TGTGACATGG CTATTGTAGG GTCGCTATTA AACGACACCG ACATTAGAAA TATCGATACG
TTAATGCAAC ATGAGAGAAA CACAGAATTT CACTCAACCG ATGCCAAAGC AAAAACAGTG
AAACTTGGAG AAACATGGGA AAAAACCATC AGATCAGGTG GCGGCGTTAC CCAGATAAAA
CATGATTTAA TTTTCCTCAT GCAAAATGAT GCCTGGTACC ATACTCGAGT CAATGCGATT
GCACAAAACC GAGATAAAGA TTCAACCTTC AAAGAAGTGT TGATTACCGC TTTAATGACA
CCATTGACTA ACAAATCATT GATAGATACA TCGCGCTCTC CAGCCCCAAA AACGCTATTC
CGTGGCCTGG ATCTGTCAGA AGAGTTTAAA AATAAATTAA TTAACCAGGC TGAAACCATC
ATTGCCAATA CGACAGAACA TCTCTTTACC GATCTGTCGA CAGAAGCCTT TAAACAAATC
AAATTAAATG ACTTTAGCCA GGTTTCTGCG AGAACTTGTG CCAGTACTTC TACTAACATT
GAAGTTCCCA GGACAATCTT TGGCTCCAAT ACTATCTTTG AAATACTTGA TCCTGATGGT
TTATTACACC CCAAACAAGT TGGAACCCAT GTATCAGGGT CAGAAAGTGA ATATTCCATT
TATTTGCCAG AAGATGTTGC CCTGGTTCCA ATCAAAGTAA GCTCTGACGG AAAAACAGTT
AAAGGCAAAG ACCGACATAT TTTTACGTTA GTCGCGGTAA AAAGCCCCGA TTTCACGCCA
AGGCATGAAA TCGGCTATGC GGTTGGACCT CTTTTGAGAA TGCAAACTCC AAAATTAGCA
GAAACTCAAA GGACAGTTGA GCAGGCAAGG GAAGAACCTG ACTTGGAAAG GGTATTCAAT
TTACAATCGA GAGTAGCAAG ACAAGCTAAA TTATTCTCCA CTGAATCAGG ATATAAAACG
TTTCTGAATG AAAAGGTGGC GCCTGTTTTG GAACAAAGCC TCAATGGACT CTTGGACAAT
AATGTAACCA TTCTAGGCAA AGTATTATCA GCATTCCCTT CAGACGGGCA ATGGTCTGCC
TTTAATTCCG TTGAAGCAAG GCAAATGAAA ATACAGATAG ATGCCATTAA GCAAATGGTT
GAAAAGAAAG CAGTTCTCGA AGGTCGAATT CTCCCTGCCT TGGCTCAATG CCAGGATGCC
TTGGAGAAGC AGAACATCGA TGGTGCATTA CAAGCGCTTA AAAACATCCC CTCTGAAAAA
GAAATGCAAA CTATGCTGTC TATTAGCAGT GGCTTGAGAG GACAAATCCA GCGTACGAAG
CAAAATTTGA CTGAGAACCT GGAACCACTA CAACGTGCCA TGACTGCCAA ATTGGTAAGC
GATCAAGAAA AAGTGAAAGT GCGTTATGAA AAGCTGATAG CTGGTATACC TCAACAGATC
ACTGATCTTG AAAAAGCAGC ACTCTCTGAT CTTGCCGGTG TTAAAAAAGT TGTCTCTCAT
TTTAATCACC TGCAAGAAGA ATTAAAGTTG CTGCGTAATG AAAAAGTTCG AATGCACACT
GGCTCTGAAA AAGTCGATTT TTCAGATATC GCACAATTAG AGGCGCAACT ACAAAAAATC
CATACTAAAT TATATGACGC CTATTTGGTT GAATTAACGA AAGAAATTTC AGTACTAGCT
AAAGAAAAAC CGAAAAACCT GGCCGACGTG AAAAGGATGG TTTCGAATTT CTATGCCATG
TCAGCTGATA TAGAACAATT GCGTAAGGAA AAGATAAAAA AACATGGTGA ATCAAAAGAT
CCGATTGATA TGTCTGACAT TGATAAATTA AAGGAAGAAC TACAAAAAAT TAATCAATTT
TTAGTGAAGG CGATGGGAAC TAATATCAGG GTTTCAATGA ATCAAATGGA AGTAAAAACT
TTTGATGCCC AGGAAAAGGA AGCGCAACAA AATTTGAAGC AACTAGACGC ACTGATCAAT
AAATTGGAGA GTTCTGATGC TGTACAGAAA CAAAAAGAGG AACTCGAAAA ATTAAACCAA
TTGCTTGCCG AGAAGCGAAA GGCCTATCCG GCAATGGTGC AGTTGCAATT CAGGAGCGAA
GCATTAATTA TCCATTTACG TGAATTATGT GAAGCTCATC AAGACCATTT GGCTAAAACA
AGAAAAACAA GGGCACAAGA AGTCACCAAT GGACGATGGA AAGTGCAATG GTTGACTGAT
TGGGTTGGTT TAACTACAGA TGAGCGGGTA ACTCTTGCCA ATAAAGAGAA AGAATTGGCT
AAATTCAAGG AAGATTTAAA CAATGACGAG TATGATTTGC AGGAACTCAT CAGTAACCTG
GCTGAGAAAA ACCCGTCAGA ATTGGAAGAA GCCATAGGGA TATCTAAAGA GAGCGCTCAG
AAATTGCACA AACTGTTATC TCATCTAAAC CACAGTACAA CATTTATGAG TAAAATCGAG
CAACGGTTAC AGTCTATTGA TGAGTTATTA AACGAGTTTG GCAAGCAATC GCCCCGAACT
GAAATAATAA AAACTGTTGA GGAAAAACAA GGAACTCTCT TAAGATTGTA A
|
|---|
| Protein sequence | MPKYVEGIEL TQEGMHAIFE RMGHPNITSG TIYNGEPTID KGALDRQGFM PVLTGVSPRQ
DSGHWIMLIK GQGNQYFLFD PLGESSGKYY QNILAKKLPG ATLSVIPNDA GLNMGLCGYW
VASVGLRAHA ALTQPIPPSL RNLGQTITQE MRDELTQDGS EKITQWLRAV GNEFPEGDIQ
PDATALRRAT EKNLRIDELQ PVFAGTTPKE ISINPTAPQE TSVPTWNGFS LYTDEIVRNA
ARYAYDNYLG KPYTGTVEAT PVNFGGQMVY RQHHGLAHTL RTMAYAEIIV EEARKAKLRG
ESLKTFADGR TLADVTPEEL RKIMIAQAFF VTGRDDEESS KNYEKYHEQS RDAFLKYVED
NKSALIPDVF KDEKDVKFYA DVIEDKDHKW ADSPAHVLVN QGHMVDLVRV KQPPESYLEY
YFSELQPWIG SKAAEAVFAA QRQFFHATYE AVAGFNSENT EPHLVVDGLG RYVIEPDGNP
IREETDDEDE EESGELKFFS QKKKLEKNQR YMRVDEYLKL DEVQKRFPGA GKKLDGGLPG
LSEYQYLQRL NSINRARCEN DVDFCLGQLQ TAHHQTKITP IKRAFQSSSE KERRQPNMDE
IAAARIVQQI MANPDCIHDD HVFLNGQKLE ENFFRDLLAK CDMAIVGSLL NDTDIRNIDT
LMQHERNTEF HSTDAKAKTV KLGETWEKTI RSGGGVTQIK HDLIFLMQND AWYHTRVNAI
AQNRDKDSTF KEVLITALMT PLTNKSLIDT SRSPAPKTLF RGLDLSEEFK NKLINQAETI
IANTTEHLFT DLSTEAFKQI KLNDFSQVSA RTCASTSTNI EVPRTIFGSN TIFEILDPDG
LLHPKQVGTH VSGSESEYSI YLPEDVALVP IKVSSDGKTV KGKDRHIFTL VAVKSPDFTP
RHEIGYAVGP LLRMQTPKLA ETQRTVEQAR EEPDLERVFN LQSRVARQAK LFSTESGYKT
FLNEKVAPVL EQSLNGLLDN NVTILGKVLS AFPSDGQWSA FNSVEARQMK IQIDAIKQMV
EKKAVLEGRI LPALAQCQDA LEKQNIDGAL QALKNIPSEK EMQTMLSISS GLRGQIQRTK
QNLTENLEPL QRAMTAKLVS DQEKVKVRYE KLIAGIPQQI TDLEKAALSD LAGVKKVVSH
FNHLQEELKL LRNEKVRMHT GSEKVDFSDI AQLEAQLQKI HTKLYDAYLV ELTKEISVLA
KEKPKNLADV KRMVSNFYAM SADIEQLRKE KIKKHGESKD PIDMSDIDKL KEELQKINQF
LVKAMGTNIR VSMNQMEVKT FDAQEKEAQQ NLKQLDALIN KLESSDAVQK QKEELEKLNQ
LLAEKRKAYP AMVQLQFRSE ALIIHLRELC EAHQDHLAKT RKTRAQEVTN GRWKVQWLTD
WVGLTTDERV TLANKEKELA KFKEDLNNDE YDLQELISNL AEKNPSELEE AIGISKESAQ
KLHKLLSHLN HSTTFMSKIE QRLQSIDELL NEFGKQSPRT EIIKTVEEKQ GTLLRL
|
|---|
| |