Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | lpp0171 |
Symbol | lvhB4 |
ID | 3119036 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Legionella pneumophila str. Paris |
Kingdom | Bacteria |
Replicon accession | NC_006368 |
Strand | + |
Start bp | 196028 |
End bp | 198524 |
Gene Length | 2497 bp |
Protein Length | 826 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637578866 |
Product | hypothetical protein |
Protein accession | YP_122517 |
Protein GI | 54296148 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
TIGRFAM ID | [TIGR00929] type IV secretion/conjugal transfer ATPase, VirB4 family |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TGGAGGGTTC GCGCTTATGA ACCTTTCTAA GACATTAAAG CACGTTTATC AGGAAGCAAA AGTGTCTAAT TTGTTTCCTG TAACGCATCT TAATAGCCCC TGCATCTTTG AGTCGCAATC AGGCTTGGTT GGGTCGGTGA TTAAGGTGAA TGGTGCGGCT TTTGAAATCG AAGAAGCTGA GACTCTAAAT CACCAACGCT TCTTGCTCCA TCAGGCATTA GTGAGTTTGG ATTCGCGTTT CATTATTTAT GTGACCACGC ACCGACAAAA AATATCATGC CCTTTGATTG GGGAATTTAA GCCAGGATTT GCCAAGGATC TGGATGAGCG TTATCAACAA CGATTTAAAG ATAAAAACCT GTATAAAAAT ACCCTGTACA TTACTGTTGT ACTTAAAGGG GATGACACCA GTAAAACAGG ATCTTGGTTG CAGTGGGCAA AAAGCCTCTC GATGAAGGGA AACAGTGAGC TTGCTGAACA CCATAGAGAA CAAAACATCC AAATCCTAAA TCGTGCTGTT GAGCAATTGC ATACGAACCT CAACTCTTTT GGGGCATCGA TACTCGGCAT GCAGGATGAG GAATTAGGTT TTAGCGAGCT GCTTCAATTC CTTGGGTTGG TTGTCAATGC AGGCCAAACA GCGTCATTCA AACATCCTGT GTACAGCCCA CCAATAGCGA ACTCGATCCC TCAGACCTTC AAACAAGAGG CCAAATACCC CGAAGGACAC CTCGGCCAAT ATTTAAGTAG CTGTCAGCTT TTATTTGGAG AGTGCATCCA GTTTCAGGGA AATACTCAAC AGGATTGTCT ATTTGGTGCG ATGCTGTCAC TCAAAAAATA CCCCACCAAC ACCGCCAGTA TCCTCTTGGA CTCCATGTTA TCGCTGGATT GTGAATTTAT TGCCACCCAC ACTTTTGCCC CCATTGGCCG TGACAGTGCC TTGGATACGA TTTCTAAAAA ACGCTCCAAA CTTTTAAATG CCGAGGACAA GGCATTAAGC CAAACCACTG CACTAACCGA TTTGGAAGAT GGAATTGCCA GTGAAACCCT GTTGCTAGGT GCACATCATC ACACCGTGAT GTTATTGGCA CCAAACAAGT CGTTATTGGA TGCAGCCATA CTGGAAGCCA CCAAACGGTA TGGAGCTACT GGAGTTGTTG TGGTGAAAGA AACACTAGGA CAAGAGCCCG CTTTCTGGAG CCAATTGCCG TGCAACCAGC ATTTTATAAC GCGAGCCTCC CTGATTACCT CTCAAAATTT TGTGGACTTT TGCCCATTAC ACAACACTCA AACGAGCTTT TCCAATGAGA ACTTTTTAGG TGGCGCGGTT ACCTTACTTG AAACCCCATC GAAAACACCA GTCTATTTCA ACTACCATGC ACGAGGCTCT AAAACCAACC CCTCCAAAGG ACACGCCGCC ATTTTCGGAG GAAATAACGC AGGAAAAACC ACACTGGTAA ACTTTCTTGA TGCACAAATG GGGCGTTTTG GTGGAAGAAG TTTTTTCATT GACCGGGATG AGTCCTCCAA AATTTATATT TTGGCTTCCG GTAACAGCTC TTACATCAAA ATAGAGCCAT CCAATCCAAT CGCCATGAAT CCCTTGCAAC TGCCGGATAC CTCAGAAAAT CGTTCATTTC TGAAGTCATG GTTTGCAACC TTGGTACAAG AAGATAGCGA ACGTGCTATC CCAAGTCCTA TTGCTGAAAT CATCAATGAC TGTATCGATT ACAGCTTTGA ACAACTCGCC CCTGAATTCA GGACGCTTAG TCACTTAAGC CAGTTTCTAC CTGTTGATTT TCCACGTTGG CCACATTTAA AAAGATGGTT GAAACGTAAT GATTCCAGAA TTGATGGCGA ATTTCATTGG CTGTTTGACA ACCAGCACGA TGCCTTAAAT CTTGATTTTG ACAAGGTGGG CTTTGATGTG ACCTACCTGA TGGACCAAGT TCAGAGCATC ATTGCAACAC CAGTTTATTT GTATTTGCTG CATCGTATGC GCCAATGCCT CGATGGACGT TTAACCTCTT TTATTATCGC CGAAGCATGG CAGCTTTTTG CGTCTCCTTT TTGGGAAAAA GCGCTTCGGG AATGGTTGCC CACAATCCGA AAGAAAAACG GGCATTTTAT TTTTGATACC CAATCTCCTA AAACCATTAC CGATTCCCCC ATTAAACACA TTGTGCTGGA TAATCTGGCC ACCTTGATAG CATTTCCCAA TCCGCTCGCA GACAAGGAAA CCTACATGGA GCATTTAAAG TTAACCGAAG CGCAATTTGA GGCGATTAAA GAAAACACAC CCGAATCACG CATTTTTTTG TATAAACAAG ACCACGAAGC CTTTTTGTGC AAACTGGATT TAAGCGGTTT AAGCCAATAC ATCAGAGTAC TTTCTGCCAA TACCCAATCC GTTAAGTTGC TGGATGACAT CATGCAAGAG GTCGGTCATG ACCCTGAGCT TTGGCTTCCT GTCTTTTTTG AAAGGAGCAA AAAATGA
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Protein sequence | MNLSKTLKHV YQEAKVSNLF PVTHLNSPCI FESQSGLVGS VIKVNGAAFE IEEAETLNHQ RFLLHQALVS LDSRFIIYVT THRQKISCPL IGEFKPGFAK DLDERYQQRF KDKNLYKNTL YITVVLKGDD TSKTGSWLQW AKSLSMKGNS ELAEHHREQN IQILNRAVEQ LHTNLNSFGA SILGMQDEEL GFSELLQFLG LVVNAGQTAS FKHPVYSPPI ANSIPQTFKQ EAKYPEGHLG QYLSSCQLLF GECIQFQGNT QQDCLFGAML SLKKYPTNTA SILLDSMLSL DCEFIATHTF APIGRDSALD TISKKRSKLL NAEDKALSQT TALTDLEDGI ASETLLLGAH HHTVMLLAPN KSLLDAAILE ATKRYGATGV VVVKETLGQE PAFWSQLPCN QHFITRASLI TSQNFVDFCP LHNTQTSFSN ENFLGGAVTL LETPSKTPVY FNYHARGSKT NPSKGHAAIF GGNNAGKTTL VNFLDAQMGR FGGRSFFIDR DESSKIYILA SGNSSYIKIE PSNPIAMNPL QLPDTSENRS FLKSWFATLV QEDSERAIPS PIAEIINDCI DYSFEQLAPE FRTLSHLSQF LPVDFPRWPH LKRWLKRNDS RIDGEFHWLF DNQHDALNLD FDKVGFDVTY LMDQVQSIIA TPVYLYLLHR MRQCLDGRLT SFIIAEAWQL FASPFWEKAL REWLPTIRKK NGHFIFDTQS PKTITDSPIK HIVLDNLATL IAFPNPLADK ETYMEHLKLT EAQFEAIKEN TPESRIFLYK QDHEAFLCKL DLSGLSQYIR VLSANTQSVK LLDDIMQEVG HDPELWLPVF FERSKK
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