Gene lpp0171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus taglpp0171 
SymbollvhB4 
ID3119036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLegionella pneumophila str. Paris 
KingdomBacteria 
Replicon accessionNC_006368 
Strand
Start bp196028 
End bp198524 
Gene Length2497 bp 
Protein Length826 aa 
Translation table11 
GC content44% 
IMG OID637578866 
Producthypothetical protein 
Protein accessionYP_122517 
Protein GI54296148 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3451] Type IV secretory pathway, VirB4 components 
TIGRFAM ID[TIGR00929] type IV secretion/conjugal transfer ATPase, VirB4 family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TGGAGGGTTC GCGCTTATGA ACCTTTCTAA GACATTAAAG CACGTTTATC AGGAAGCAAA 
AGTGTCTAAT TTGTTTCCTG TAACGCATCT TAATAGCCCC TGCATCTTTG AGTCGCAATC
AGGCTTGGTT GGGTCGGTGA TTAAGGTGAA TGGTGCGGCT TTTGAAATCG AAGAAGCTGA
GACTCTAAAT CACCAACGCT TCTTGCTCCA TCAGGCATTA GTGAGTTTGG ATTCGCGTTT
CATTATTTAT GTGACCACGC ACCGACAAAA AATATCATGC CCTTTGATTG GGGAATTTAA
GCCAGGATTT GCCAAGGATC TGGATGAGCG TTATCAACAA CGATTTAAAG ATAAAAACCT
GTATAAAAAT ACCCTGTACA TTACTGTTGT ACTTAAAGGG GATGACACCA GTAAAACAGG
ATCTTGGTTG CAGTGGGCAA AAAGCCTCTC GATGAAGGGA AACAGTGAGC TTGCTGAACA
CCATAGAGAA CAAAACATCC AAATCCTAAA TCGTGCTGTT GAGCAATTGC ATACGAACCT
CAACTCTTTT GGGGCATCGA TACTCGGCAT GCAGGATGAG GAATTAGGTT TTAGCGAGCT
GCTTCAATTC CTTGGGTTGG TTGTCAATGC AGGCCAAACA GCGTCATTCA AACATCCTGT
GTACAGCCCA CCAATAGCGA ACTCGATCCC TCAGACCTTC AAACAAGAGG CCAAATACCC
CGAAGGACAC CTCGGCCAAT ATTTAAGTAG CTGTCAGCTT TTATTTGGAG AGTGCATCCA
GTTTCAGGGA AATACTCAAC AGGATTGTCT ATTTGGTGCG ATGCTGTCAC TCAAAAAATA
CCCCACCAAC ACCGCCAGTA TCCTCTTGGA CTCCATGTTA TCGCTGGATT GTGAATTTAT
TGCCACCCAC ACTTTTGCCC CCATTGGCCG TGACAGTGCC TTGGATACGA TTTCTAAAAA
ACGCTCCAAA CTTTTAAATG CCGAGGACAA GGCATTAAGC CAAACCACTG CACTAACCGA
TTTGGAAGAT GGAATTGCCA GTGAAACCCT GTTGCTAGGT GCACATCATC ACACCGTGAT
GTTATTGGCA CCAAACAAGT CGTTATTGGA TGCAGCCATA CTGGAAGCCA CCAAACGGTA
TGGAGCTACT GGAGTTGTTG TGGTGAAAGA AACACTAGGA CAAGAGCCCG CTTTCTGGAG
CCAATTGCCG TGCAACCAGC ATTTTATAAC GCGAGCCTCC CTGATTACCT CTCAAAATTT
TGTGGACTTT TGCCCATTAC ACAACACTCA AACGAGCTTT TCCAATGAGA ACTTTTTAGG
TGGCGCGGTT ACCTTACTTG AAACCCCATC GAAAACACCA GTCTATTTCA ACTACCATGC
ACGAGGCTCT AAAACCAACC CCTCCAAAGG ACACGCCGCC ATTTTCGGAG GAAATAACGC
AGGAAAAACC ACACTGGTAA ACTTTCTTGA TGCACAAATG GGGCGTTTTG GTGGAAGAAG
TTTTTTCATT GACCGGGATG AGTCCTCCAA AATTTATATT TTGGCTTCCG GTAACAGCTC
TTACATCAAA ATAGAGCCAT CCAATCCAAT CGCCATGAAT CCCTTGCAAC TGCCGGATAC
CTCAGAAAAT CGTTCATTTC TGAAGTCATG GTTTGCAACC TTGGTACAAG AAGATAGCGA
ACGTGCTATC CCAAGTCCTA TTGCTGAAAT CATCAATGAC TGTATCGATT ACAGCTTTGA
ACAACTCGCC CCTGAATTCA GGACGCTTAG TCACTTAAGC CAGTTTCTAC CTGTTGATTT
TCCACGTTGG CCACATTTAA AAAGATGGTT GAAACGTAAT GATTCCAGAA TTGATGGCGA
ATTTCATTGG CTGTTTGACA ACCAGCACGA TGCCTTAAAT CTTGATTTTG ACAAGGTGGG
CTTTGATGTG ACCTACCTGA TGGACCAAGT TCAGAGCATC ATTGCAACAC CAGTTTATTT
GTATTTGCTG CATCGTATGC GCCAATGCCT CGATGGACGT TTAACCTCTT TTATTATCGC
CGAAGCATGG CAGCTTTTTG CGTCTCCTTT TTGGGAAAAA GCGCTTCGGG AATGGTTGCC
CACAATCCGA AAGAAAAACG GGCATTTTAT TTTTGATACC CAATCTCCTA AAACCATTAC
CGATTCCCCC ATTAAACACA TTGTGCTGGA TAATCTGGCC ACCTTGATAG CATTTCCCAA
TCCGCTCGCA GACAAGGAAA CCTACATGGA GCATTTAAAG TTAACCGAAG CGCAATTTGA
GGCGATTAAA GAAAACACAC CCGAATCACG CATTTTTTTG TATAAACAAG ACCACGAAGC
CTTTTTGTGC AAACTGGATT TAAGCGGTTT AAGCCAATAC ATCAGAGTAC TTTCTGCCAA
TACCCAATCC GTTAAGTTGC TGGATGACAT CATGCAAGAG GTCGGTCATG ACCCTGAGCT
TTGGCTTCCT GTCTTTTTTG AAAGGAGCAA AAAATGA
 
Protein sequence
MNLSKTLKHV YQEAKVSNLF PVTHLNSPCI FESQSGLVGS VIKVNGAAFE IEEAETLNHQ 
RFLLHQALVS LDSRFIIYVT THRQKISCPL IGEFKPGFAK DLDERYQQRF KDKNLYKNTL
YITVVLKGDD TSKTGSWLQW AKSLSMKGNS ELAEHHREQN IQILNRAVEQ LHTNLNSFGA
SILGMQDEEL GFSELLQFLG LVVNAGQTAS FKHPVYSPPI ANSIPQTFKQ EAKYPEGHLG
QYLSSCQLLF GECIQFQGNT QQDCLFGAML SLKKYPTNTA SILLDSMLSL DCEFIATHTF
APIGRDSALD TISKKRSKLL NAEDKALSQT TALTDLEDGI ASETLLLGAH HHTVMLLAPN
KSLLDAAILE ATKRYGATGV VVVKETLGQE PAFWSQLPCN QHFITRASLI TSQNFVDFCP
LHNTQTSFSN ENFLGGAVTL LETPSKTPVY FNYHARGSKT NPSKGHAAIF GGNNAGKTTL
VNFLDAQMGR FGGRSFFIDR DESSKIYILA SGNSSYIKIE PSNPIAMNPL QLPDTSENRS
FLKSWFATLV QEDSERAIPS PIAEIINDCI DYSFEQLAPE FRTLSHLSQF LPVDFPRWPH
LKRWLKRNDS RIDGEFHWLF DNQHDALNLD FDKVGFDVTY LMDQVQSIIA TPVYLYLLHR
MRQCLDGRLT SFIIAEAWQL FASPFWEKAL REWLPTIRKK NGHFIFDTQS PKTITDSPIK
HIVLDNLATL IAFPNPLADK ETYMEHLKLT EAQFEAIKEN TPESRIFLYK QDHEAFLCKL
DLSGLSQYIR VLSANTQSVK LLDDIMQEVG HDPELWLPVF FERSKK