Gene lpp0087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus taglpp0087 
Symbol 
ID3118859 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLegionella pneumophila str. Paris 
KingdomBacteria 
Replicon accessionNC_006368 
Strand
Start bp89028 
End bp90641 
Gene Length1614 bp 
Protein Length537 aa 
Translation table11 
GC content37% 
IMG OID637578787 
Producthypothetical protein 
Protein accessionYP_122438 
Protein GI54296069 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain
[COG2200] FOG: EAL domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATTA AATCTAATTT GGCACATAGC TCTGTTATCC TGAAAGGTCA TGTTAATCGA 
TATGCCTTTT TAGGATTGCT GATTTCTGTT GGCAGTATCT TGATTGCAAG TTGTATCGTT
TCCTATCAAT TGACTGGATC TGTGAGTTTA GGCGGGTTTA TTCAGGCTCA AAGATCTAAC
CCGGCAATTT GGATCCTGGA TTTAACACCT TTTATGTTTG TGTATTGGGG GCAAGCATTT
TGTTATGGAT TGGTTAACAA AGCGGAGAGT TTACTGGTTG ATAAAACCAA AGAGCTTTTA
AATATCAGTG GAAATCTGGA ATTAAAGCTT AAATATGAAA GTAATCACGA TAGCTTGACC
AATTTGCCTA ACAACCGCTT GTTAAATGAA AAAATACGGC TCGCCATCGA ACAATTGGGA
GCACAGGGTG AATTAGCTGT TATTGTGATA AAAATTAACG ATCTTAATTA TAATTTCAGC
TCATTTAATG CCAATAATAT CGTAAAGCAA TTTGCTGAAA AATTAAAATC GATTTTGATT
GATCCCTACA TGCTAAAAGC TTCTCTTGGA ATTAATATGG TTGCAAGATT GCAAAGTGAT
GAATTTGCCA TATTGATGCC GAGACTTAAA AAAGATTTGG ATATTAATGA GCTATTAATC
CATCTTCTTA CCTTGCTGAA TAATAACCTG ATGGTGGATG GAATTAGTAT CAATGTGACA
TCTACTGTTG GTGCCGCTAT CTATCCTGTC CATGGAGAGG AAGACGATGT TTTAGTAAAT
CATGCCATTA TCGCAGTTTA CCAGGCACGA AAGGAAAACA AATCCTATGC AATTTACAGC
CCCGAAATGG AAGAGGACCT TATACAGAAT CGGATGGTGA TGAATGAACT GCAACGCTCC
ATTGAAAACA AAGATTTGAA AATTTATTAC CAGCCAATAG TTGAGCTGGC TAATGGCCAA
ATTGTAGGTG CCGAGTCATC AGCTCGTTTT GAACATCCTG AATTGGGTTT ATTAAGTGCA
GAAAAATTCA TGCCTTTAAT CGAGGGAACC AATTTAATTC ATAATTTGAC AACTCTTATG
CTTAAGGAAG TTATAAAGCA ATTAGCCGCC TGGCATGATG CTGGACATAA AATTTTTGTC
TCTGTAAATC TGTCAGTGCA CCATGAGTTG CCTGAATTAA TAGAGAAATT ATTAAATGAT
TATGAGATTG CCCCGCAATT CTTGAAACTT GAATTTACCG AAAGGGCTTG TTTAACTGAG
CAGATGGTTA CCAAAGAAGT GTTTGATCGA TTATCAACCA TGGGCATCAA ATTATGCATT
GATGATTTTT GCAGTGAGAA CTCTTCCTTC ATTCATTTGA CTAATTTCCC TATCGAAAAC
ATTAAAATTG AGAAATCATT CGTACTGAAA ATTGCAAAAG ACGCAAAGAA AGCCAAAATT
GTAGAGGCTA TAGTAAAACT AGCCCAAACA TTAGGGTGGG AACCCCTGGC AGATGGCATC
GCTGATCAAA ATGCATTGGA AAAATTAAGA GACTTAGGCT GCTTGTATGG TCAGGGATTA
TATTTTTCTC GAGCGGTCAA TGTGGCTGAA TTTACATCAT TGCTAAAGAA ATGA
 
Protein sequence
MNIKSNLAHS SVILKGHVNR YAFLGLLISV GSILIASCIV SYQLTGSVSL GGFIQAQRSN 
PAIWILDLTP FMFVYWGQAF CYGLVNKAES LLVDKTKELL NISGNLELKL KYESNHDSLT
NLPNNRLLNE KIRLAIEQLG AQGELAVIVI KINDLNYNFS SFNANNIVKQ FAEKLKSILI
DPYMLKASLG INMVARLQSD EFAILMPRLK KDLDINELLI HLLTLLNNNL MVDGISINVT
STVGAAIYPV HGEEDDVLVN HAIIAVYQAR KENKSYAIYS PEMEEDLIQN RMVMNELQRS
IENKDLKIYY QPIVELANGQ IVGAESSARF EHPELGLLSA EKFMPLIEGT NLIHNLTTLM
LKEVIKQLAA WHDAGHKIFV SVNLSVHHEL PELIEKLLND YEIAPQFLKL EFTERACLTE
QMVTKEVFDR LSTMGIKLCI DDFCSENSSF IHLTNFPIEN IKIEKSFVLK IAKDAKKAKI
VEAIVKLAQT LGWEPLADGI ADQNALEKLR DLGCLYGQGL YFSRAVNVAE FTSLLKK