Gene lpp0064 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus taglpp0064 
SymbolhipA 
ID3119053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLegionella pneumophila str. Paris 
KingdomBacteria 
Replicon accessionNC_006368 
Strand
Start bp67037 
End bp68341 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content39% 
IMG OID637578764 
ProductHipA protein, DNA binding regulator 
Protein accessionYP_122416 
Protein GI54296047 
COG category[R] General function prediction only 
COG ID[COG3550] Uncharacterized protein related to capsule biosynthesis enzymes 
TIGRFAM ID[TIGR03071] HipA N-terminal domain 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAATGC GTAAATTATA CATATTGATG AACAATGAGC TCGTGGGGGT GCTTACCCAG 
GATAATGCAG GTGGTTTGAG TTTTTCCTAC GTTGCTGACT GGATTTCCAA GCCGCATTCA
CGCCCAGTTT CTTTATCGTT ACCGTTAATA AATCAAAGGT TTTCAGGAGA AGTTGTTTAT
AACTTTTTTG ATAATTTACT TCCCGATAAT CCACAGATAA GAGCGAGAAT TCAAGCTCGT
TTTCAGGCAA AATCATCGCG ACCGTTTGAT TTATTGGCGT TAATTGGCGG TGATTGTGTT
GGTGCAATAC AAATTGTTGA ACGTATTCCT CAGACACAGC GTCTAAGCAT TGAAAGTCAC
GTTGTCAGTG AGGCCGAGAT AGCTCGTACT TTACGTTCTT ACCAAACCTC ACCACTGGGA
ATGGATAAAG AGGATGATGA GTTTAGAATC TCAATAGCCG GTGCTCAGGA AAAAACGGCT
TTTCTATATT ACCAAAATGA ATGGCATAAA CCATTTGGAC CTACACCAAC AACTCACATA
TTCAAATTAC CTATTGGATA TTTACCACAT CAAGGAATTG ATTTAAGTGA GAGTTGTGAA
AATGAGCATC TCTGTTTACT ACTAGCCAGC AAATTTGGTT TAGAGGTTGC AAAATCAAAA
ATCTTACAAT TCGAAGATGA AAAGGTGCTG GTTGTCGAAA GATTTGATAG AAAATGGAGT
CGAGATAACC GTTATATACT CAGGTTACCG CAAGAAGACC TATGCCAAGC GTTGGGTTAT
TCACCAAATT TAAAATATCA GTCAGATGGT GGCCCCGGTA TTAAAGAAAT TATGCAGCTA
CTTAATGGCT CACAGCAGCC TCAAAAAGAT AGAGATGAAT TTTTCAGAGC ACAGGTTGTT
TACTGGTGCC TTGGTGCTAT TGATGCGCAT GCCAAAAACT TCAGTATAAG TATACAACCA
CAAGGCGGTT ACCAGCTCAC CCCCTTATAC GACATCATTT CAGCCTATGC TATCGTGGAA
CAAAAACAGC TATCCTTTAA GAAATTGAAA ATGGCAATGG CTTTATATGG TAAAAATAGT
CATTACAAGA TTGACGGTAT TCAAAAAAGA CACTTTATTG AAACAGCAAA ATACGTTCAA
TATTCTAAAA TTAAAGCAGC TCAGATTTTT GAACAAGTGA TTGACCGTAT TGATTCTGCT
ATCGATGAGG TCTCAACACA ATTACCAAAC CACTTCCCAG AAAAGATTGC AGATCCAATC
TTCAAAGGGA TGAGAGCTTT TAAGGAGCGA ATGATATCCA CATAA
 
Protein sequence
MVMRKLYILM NNELVGVLTQ DNAGGLSFSY VADWISKPHS RPVSLSLPLI NQRFSGEVVY 
NFFDNLLPDN PQIRARIQAR FQAKSSRPFD LLALIGGDCV GAIQIVERIP QTQRLSIESH
VVSEAEIART LRSYQTSPLG MDKEDDEFRI SIAGAQEKTA FLYYQNEWHK PFGPTPTTHI
FKLPIGYLPH QGIDLSESCE NEHLCLLLAS KFGLEVAKSK ILQFEDEKVL VVERFDRKWS
RDNRYILRLP QEDLCQALGY SPNLKYQSDG GPGIKEIMQL LNGSQQPQKD RDEFFRAQVV
YWCLGAIDAH AKNFSISIQP QGGYQLTPLY DIISAYAIVE QKQLSFKKLK MAMALYGKNS
HYKIDGIQKR HFIETAKYVQ YSKIKAAQIF EQVIDRIDSA IDEVSTQLPN HFPEKIADPI
FKGMRAFKER MIST