| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | plpl0026 |
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| Symbol | |
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| ID | 3115703 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Legionella pneumophila str. Lens |
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| Kingdom | Bacteria |
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| Replicon accession | NC_006366 |
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| Strand | + |
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| Start bp | 23503 |
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| End bp | 24243 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637578669 |
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| Product | conjugal pilus assembly protein TraF |
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| Protein accession | YP_122319 |
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| Protein GI | 54292932 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02739] type-F conjugative transfer system pilin assembly protein TraF |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.366361 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTAATA GGATGCTAAT TGTTTTTTTG CTACTTAGTG GGGTTGCGTT TGCTGATAAA
CCGGTGGGTT TTCTATGGTA TACAAAAGAA AGGGAAACAA AAAGAGTCGA GAAAAAAACC
TCGGGTATTC CTTTTAAGAG TCTAAGCTAT ACAGAGCGCG ATGCTGTTCT GCGCTTCTAC
ACCATGGAAG CGCTTCATAA AGCACGGTAC ACCAAAAAGA TGGAGGACAT GCGCGTATTT
TTAAGTCTGC AAGATTACTG GCTTAAAGAG TCCTCCCGAT TTAAGTCATT GTTTCAGAAA
ACGATGTTGG CACATCCAGA ATATGATTAT GCAGTGACTC ATCCGACTTC TAATCTGGGC
GCAAAAATCA CCGATGAGGT GCGCGAATCC CAAACCATAG AAGTTATAAA CCGCTTGTCC
AAATCACATG GCTTGTTGTT TTTTTATCGT GGAAAAAGCC CTTATGACTT AAAGCAAATA
CCCATTATTG TTGATTTTTG CAAGCGATTT CGCATTCAAC TGATCCCAGT TAGTGTTGAT
GGCGCAACCT CTCCCGAACT GCTGAATTCT CGAATGGATC AAGGGCAAGC TAATCGATTG
GGTGTTCGTT ATTTTCCAGC ACTGCTGTTG GTGAATCCTG CAAGCCAACA GGTTTCACCT
GTGGCATATG GCTTAACTAC GCAGGATGTC TTGATGGAAC GTATAAAACA AGTGGTCAAC
CAATTTAAAG GAGAGGAATA A
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| Protein sequence | MINRMLIVFL LLSGVAFADK PVGFLWYTKE RETKRVEKKT SGIPFKSLSY TERDAVLRFY
TMEALHKARY TKKMEDMRVF LSLQDYWLKE SSRFKSLFQK TMLAHPEYDY AVTHPTSNLG
AKITDEVRES QTIEVINRLS KSHGLLFFYR GKSPYDLKQI PIIVDFCKRF RIQLIPVSVD
GATSPELLNS RMDQGQANRL GVRYFPALLL VNPASQQVSP VAYGLTTQDV LMERIKQVVN
QFKGEE
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